RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 IKBIPQ70UQ0 350 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 FAM114A1Q8IWE2 563 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 KIRREL3Q8IZU9 778 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 FBXL16Q8N461 479 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 TRIML1Q8N9V2 468 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 RASL10AQ92737 203 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 C16orf70Q9BSU1 422 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 RAB11FIP5Q9BXF6 653 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 FGF21Q9NSA1 209 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 ZNF701Q9NV72 531 aaPredicted RBP3.89□□□□□ -1.79
CD46-213ENST00000471987 LAS1LQ9Y4W2 734 aaKnown RBP3.89□□□□□ -1.79
CD46-213ENST00000471987 ADAMTS9Q9P2N4 1935 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 IGHV3OR16-10A0A075B7F0 116 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 HYKKA2RU49 373 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 A8MU10 97 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 EPM2AB3EWF7 344 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 MAGEC1O60732 1142 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 CAPN2P17655 700 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 OPRL1P41146 370 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 FASTKD3Q14CZ7 662 aaKnown RBP3.88□□□□□ -1.79
CD46-213ENST00000471987 DLG2Q15700 870 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 C20orf194Q5TEA3 1177 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 CHST9Q7L1S5 443 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 PAPD5Q8NDF8 572 aaKnown RBP3.88□□□□□ -1.79
CD46-213ENST00000471987 OR13J1Q8NGT2 312 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 MOSPD2Q8NHP6 518 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 MORC4Q8TE76 937 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 SCFD2Q8WU76 684 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 CEP295NLQ96MC4 621 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 SOSTQ9BQB4 213 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 UNC45AQ9H3U1 944 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 THEGQ9P2T0 379 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
CD46-213ENST00000471987 MAN1B1Q9UKM7 699 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 MTUS1Q9ULD2 1270 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 ANGPTL3Q9Y5C1 460 aa3.88□□□□□ -1.79
CD46-213ENST00000471987 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 CDRT15L2A8MXV6 281 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 NPHP1O15259 732 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 IDH3BO43837 385 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 CLTBP09497 229 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 DNAH10OSP0CZ25 163 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 IGHV4-31P0DP07 118 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 LEPRP48357 1165 aaKnown RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 CYCSP99999 105 aaKnown RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 COX10Q12887 443 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 MAMLD1Q13495 774 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 MMS22LQ6ZRQ5 1243 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 RSRC2Q7L4I2 434 aaKnown RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 COMMD2Q86X83 199 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 CERS3Q8IU89 383 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 WDTC1Q8N5D0 677 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 PHLDA1Q8WV24 401 aaPredicted RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 IRGQQ8WZA9 623 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 ARSGQ96EG1 525 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 CCDC34Q96HJ3 373 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 SRSF8Q9BRL6 282 aaKnown RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 BTBD10Q9BSF8 475 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 NUP85Q9BW27 656 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 RTN4RQ9BZR6 473 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 S1PR5Q9H228 398 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 CPVLQ9H3G5 476 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 SPHK2Q9NRA0 654 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 PANK4Q9NVE7 773 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 GRIP1Q9Y3R0 1128 aa3.87□□□□□ -1.79
CD46-213ENST00000471987 ARID4BQ4LE39 1312 aaPredicted RBP3.87□□□□□ -1.79
CD46-213ENST00000471987 RUSC2Q8N2Y8 1516 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 MYH15Q9Y2K3 1946 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 ANKRD61A6NGH8 418 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 MITFO75030 526 aaPredicted RBP3.86□□□□□ -1.79
CD46-213ENST00000471987 TBX18O95935 607 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 SCGB1D1O95968 90 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 MMP9P14780 707 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 CYP2A7P20853 494 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 RBMS1P29558 406 aaKnown RBP3.86□□□□□ -1.79
CD46-213ENST00000471987 NR1D2Q14995 579 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 SLC25A30Q5SVS4 291 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 SLC39A11Q8N1S5 342 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 SMAP2Q8WU79 429 aaPredicted RBP3.86□□□□□ -1.79
CD46-213ENST00000471987 LMF2Q9BU23 707 aaKnown RBP3.86□□□□□ -1.79
CD46-213ENST00000471987 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 MUTYHQ9UIF7 546 aa3.86□□□□□ -1.79
CD46-213ENST00000471987 LRRC72A6NJI9 287 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 B4E171 279 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 C22orf31O95567 290 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 TSPAN7P41732 249 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 CALCOCO2Q13137 446 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 ITPRIPL2Q3MIP1 535 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 PDLIM3Q53GG5 364 aaPredicted RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 SNX30Q5VWJ9 437 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 LYSMD4Q5XG99 296 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 TMEM139Q8IV31 216 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 VANGL1Q8TAA9 524 aaPredicted RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 UCMAQ8WVF2 138 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 USP6NLQ92738 828 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms