RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 DMAC2Q9NW81 257 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM248Q9NWD8 314 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 RAB20Q9NX57 234 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 ALKBH4Q9NXW9 302 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 PSD3Q9NYI0 1048 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 UBA2Q9UBT2 640 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 GTF3C3Q9Y5Q9 886 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 CFAP20Q9Y6A4 193 aaKnown RBP6.23□□□□□ -1.41
HDAC3-206ENST00000471968 DOCK4Q8N1I0 1966 aa6.23□□□□□ -1.41
HDAC3-206ENST00000471968 A0A1B0GX78 115 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 VSTM2BA6NLU5 285 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 HSPB2A8KAH6 182 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 FADS2P1A8MWK0 482 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 SIAH2O43255 324 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 NME2P1O60361 137 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 SLC25A12O75746 678 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CPP00450 1065 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 GLI1P08151 1106 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CCDC166P0CW27 439 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 MTHFD1P11586 935 aaKnown RBP6.22□□□□□ -1.41
HDAC3-206ENST00000471968 RHOQP17081 205 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CTPS1P17812 591 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 NME2P22392 152 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CXCR2P25025 360 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 PRDX3P30048 256 aaKnown RBP6.22□□□□□ -1.41
HDAC3-206ENST00000471968 SULT1E1P49888 294 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 VSX2P58304 361 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-206ENST00000471968 YWHAEP62258 255 aaKnown RBP6.22□□□□□ -1.41
HDAC3-206ENST00000471968 AP2B1P63010 937 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 VLDLRP98155 873 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 DEUP1Q05D60 604 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 HSPB2Q16082 182 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CCDC38Q502W7 563 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 LRRC66Q68CR7 880 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 KRT39Q6A163 491 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CYB5R2Q6BCY4 276 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 DENND1BQ6P3S1 775 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 TLDC1Q6P9B6 456 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 FIGLAQ6QHK4 219 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 SEZ6L2Q6UXD5 910 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 NLRP9Q7RTR0 991 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM110Q86TL2 294 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 POGLUT1Q8NBL1 392 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 NAXEQ8NCW5 288 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 FBXL13Q8NEE6 735 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 OR4E2Q8NGC2 313 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 GOLGA5Q8TBA6 731 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CREB3L4Q8TEY5 395 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF354BQ96LW1 612 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 TNFRSF13CQ96RJ3 184 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 PIGQQ9BRB3 760 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 PITPNM3Q9BZ71 974 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 FAM207AQ9NSI2 230 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-206ENST00000471968 KCNS2Q9ULS6 477 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 PSMD13Q9UNM6 376 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 NOTCH3Q9UM47 2321 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 CADP27708 2225 aa6.22□□□□□ -1.41
HDAC3-206ENST00000471968 SCN2AQ99250 2005 aa6.21□□□□□ -1.41
HDAC3-206ENST00000471968 SLC35F4A4IF30 521 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 RCCD1A6NED2 376 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 C2orf81A6NN90 581 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 GABRR3A8MPY1 467 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 EEF1E1-BLOC1S5C9J1V9 151 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 BCKDKO14874 412 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 KMOO15229 486 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 EEF1E1O43324 174 aaKnown RBP6.21□□□□□ -1.42
HDAC3-206ENST00000471968 MAN1A2O60476 641 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 DAB1O75553 588 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ICAM2P13598 275 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 GTF2H1P32780 548 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 STAT6P42226 847 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 OR1D4P47884 311 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 CSNK1DP48730 415 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 SCNN1BP51168 640 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 PTSQ03393 145 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ANKRD1Q15327 319 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 NFIL3Q16649 462 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ATP13A4Q4VNC1 1196 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 MCTP1Q6DN14 999 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 KDELC1Q6UW63 502 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ARHGEF18Q6ZSZ5 1173 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 LRRTM4Q86VH4 590 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 C1QL4Q86Z23 238 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 CRLF3Q8IUI8 442 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 AMER3Q8N944 861 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 NUP43Q8NFH3 380 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 SEMA6DQ8NFY4 1073 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 STT3BQ8TCJ2 826 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 DLG3Q92796 817 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ISL2Q96A47 359 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 MIEF2Q96C03 454 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 SMC6Q96SB8 1091 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 TIMM29Q9BSF4 260 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 PANK2Q9BZ23 570 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 ASNSD1Q9NWL6 643 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 SLC24A2Q9UI40 661 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 INTUQ9ULD6 942 aa6.21□□□□□ -1.42
HDAC3-206ENST00000471968 FRMD4BQ9Y2L6 1034 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms