RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TAP2Q03519 686 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PCDH1Q08174 1060 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 SEPT7Q16181 437 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 DEFB133Q30KQ1 61 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 UNC5DQ6UXZ4 953 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 ZYG11AQ6WRX3 759 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 TMPRSS9Q7Z410 1059 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 C10orf107Q8IVU9 208 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 ADGRF3Q8IZF5 1079 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 ARL14Q8N4G2 192 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 FAM181AQ8N9Y4 354 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 HMGCLL1Q8TB92 370 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 FBXL8Q96CD0 374 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 FAM122AQ96E09 287 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 CAMK1GQ96NX5 476 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 NSUN5Q96P11 429 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PRRX2Q99811 253 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 MRPL57Q9BQC6 102 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 MRPL46Q9H2W6 279 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 GSTO2Q9H4Y5 243 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PARVBQ9HBI1 364 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 MED4Q9NPJ6 270 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 INTS7Q9NVH2 962 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 STOX2Q9P2F5 926 aaPredicted RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 CPSF2Q9P2I0 782 aaKnown RBP9.61□□□□□ -0.87
SF3A1-207ENST00000471342 SPASTQ9UBP0 616 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 TLK1Q9UKI8 766 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PLAGL1Q9UM63 463 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 TMEM131Q92545 1883 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 PI4KAP42356 2102 aa9.61□□□□□ -0.87
SF3A1-207ENST00000471342 CCDC189A1A4V9 331 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 BTN3A3O00478 584 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 COPEO14579 308 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 FFAR2O15552 330 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 ITM2AO43736 263 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 C8GP07360 202 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 RPS17P08708 135 aaKnown RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 GNSP15586 552 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CD22P20273 847 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 GDF5P43026 501 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 BLKP51451 505 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 C21orf59P57076 290 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 DNAJB13P59910 316 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 PPP2R2AP63151 447 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SNRPNP63162 240 aaKnown RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 NHLH1Q02575 133 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 PLOD1Q02809 727 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SP140Q13342 867 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SETDB1Q15047 1291 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TEAD4Q15561 434 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CSRP2Q16527 193 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CDKL4Q5MAI5 379 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 RAPH1Q70E73 1250 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 UBE2R2Q712K3 238 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TAOK1Q7L7X3 1001 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 PIP4P1Q86T03 277 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TBC1D1Q86TI0 1168 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TBC1D21Q8IYX1 336 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SDR16C5Q8N3Y7 309 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 MINDY1Q8N5J2 469 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 KYQ8NBH2 561 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 ARMC2Q8NEN0 867 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 OR52E1Q8NGJ3 308 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 OR4C6Q8NH72 309 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 STAG3L4Q8TBR4 150 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 ZDHHC1Q8WTX9 485 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 UBTD2Q8WUN7 234 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 JPH3Q8WXH2 748 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 L3HYPDHQ96EM0 354 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 PKNOX2Q96KN3 472 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TMEM237Q96Q45 408 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SMC6Q96SB8 1091 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SORT1Q99523 831 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 GATA5Q9BWX5 397 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SGPP1Q9BX95 441 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 GSDMCQ9BYG8 508 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CCDC68Q9H2F9 335 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CNOT10Q9H9A5 744 aaKnown RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 UCK1Q9HA47 277 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SEMA4GQ9NTN9 838 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 OXSMQ9NWU1 459 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 SPHK1Q9NYA1 384 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 CPNE7Q9UBL6 633 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 PCDHGB2Q9Y5G2 931 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 RNF215Q9Y6U7 377 aa9.6□□□□□ -0.87
SF3A1-207ENST00000471342 ARHGEF17Q96PE2 2063 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 EP300Q09472 2414 aaPredicted RBP9.6□□□□□ -0.87
SF3A1-207ENST00000471342 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF292O60281 2723 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 KCNE1BA0A087WTH5 132 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 KIR2DS5A0A0G2JLQ3 304 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 A0A0G2JNG1 304 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms