RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 PCDHGA7Q9Y5G6 932 aa25.22■■□□□ 1.63
PDCD4-205ENST00000467574 PSAT1Q9Y617 370 aa25.22■■□□□ 1.63
PDCD4-205ENST00000467574 NFS1Q9Y697 457 aa25.22■■□□□ 1.63
PDCD4-205ENST00000467574 ITPR1Q14643 2758 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 B4E171 279 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 BTN3A1O00481 513 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 POLR2CP19387 275 aaPredicted RBP25.21■■□□□ 1.63
PDCD4-205ENST00000467574 TSPAN7P41732 249 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 KPNA2P52292 529 aaKnown RBP25.21■■□□□ 1.63
PDCD4-205ENST00000467574 AMIGO1Q86WK6 493 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 DCUN1D3Q8IWE4 304 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 KLHL6Q8WZ60 621 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 FGF11Q92914 225 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 CD180Q99467 661 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 GPR21Q99679 349 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 POMT2Q9UKY4 750 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 PLAGL1Q9UM63 463 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 DHRS7Q9Y394 339 aa25.21■■□□□ 1.63
PDCD4-205ENST00000467574 IGHV5-51A0A0C4DH38 117 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 TLCD2A6NGC4 264 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 EFCAB7A8K855 629 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 C9orf172C9J069 976 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 MATN4O95460 622 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 C1QAP02745 245 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 SSTR1P30872 391 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 MAPK10P53779 464 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 CACHD1Q5VU97 1274 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 CAPN12Q6ZSI9 719 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 CEP112Q8N8E3 955 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 CFAP61Q8NHU2 1237 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 PPM1MQ96MI6 270 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 MAP3K3Q99759 626 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 SMYD2Q9NRG4 433 aa25.2■■□□□ 1.62
PDCD4-205ENST00000467574 TSR3Q9UJK0 312 aaKnown RBP25.2■■□□□ 1.62
PDCD4-205ENST00000467574 TDRKHQ9Y2W6 561 aaKnown RBP25.2■■□□□ 1.62
PDCD4-205ENST00000467574 SRRM3A6NNA2 597 aaPredicted RBP25.19■■□□□ 1.62
PDCD4-205ENST00000467574 RASSF9O75901 435 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 PKLRP30613 574 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 SLC5A2P31639 672 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 SHMT2P34897 504 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 GPX6P59796 221 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 CUL1Q13616 776 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 KYNUQ16719 465 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 GLE1Q53GS7 698 aaKnown RBP25.19■■□□□ 1.62
PDCD4-205ENST00000467574 DNTTIP2Q5QJE6 756 aaKnown RBP25.19■■□□□ 1.62
PDCD4-205ENST00000467574 CCDC25Q86WR0 208 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 FAM129CQ86XR2 697 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 USP7Q93009 1102 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 FOXJ2Q9P0K8 574 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 ZFATQ9P243 1243 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 ACSL6Q9UKU0 697 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 PTPRQQ9UMZ3 2332 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 ANKRD12Q6UB98 2062 aa25.19■■□□□ 1.62
PDCD4-205ENST00000467574 NVLO15381 856 aaKnown RBP25.18■■□□□ 1.62
PDCD4-205ENST00000467574 PRAMEF10O60809 474 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 C1orf105O95561 183 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 RPN2P04844 631 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 BDKRB1P46663 353 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 SEPHS1P49903 392 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 CDKN2DP55273 166 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 KLHL38Q2WGJ6 581 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 UBXN4Q92575 508 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 SLC41A2Q96JW4 573 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 MCMBPQ9BTE3 642 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 B3GNT4Q9C0J1 378 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 FAM114A2Q9NRY5 505 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 CIDEBQ9UHD4 219 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 PCDHGA3Q9Y5H0 932 aa25.18■■□□□ 1.62
PDCD4-205ENST00000467574 TCRBV9S1A1TA0A576 114 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 KRT87PA6NCN2 255 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 MATN2O00339 956 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 VPS26AO75436 327 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 PIAS1O75925 651 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 NELFEP18615 380 aaKnown RBP25.17■■□□□ 1.62
PDCD4-205ENST00000467574 ECHS1P30084 290 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 MAGEA4P43358 317 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 PCBP4P57723 403 aaKnown RBP25.17■■□□□ 1.62
PDCD4-205ENST00000467574 MC2RQ01718 297 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 TTLL9Q3SXZ7 439 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 CCSMST1Q4G0I0 132 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 ARMC6Q6NXE6 501 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 NEK10Q6ZWH5 1172 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 SLC26A11Q86WA9 606 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 RASGRP3Q8IV61 690 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 PALM2Q8IXS6 379 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 LINC01555Q8NAE3 123 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 LRRN4CLQ8ND94 238 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 FLVCR1-AS1Q8TAF5 88 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 SKA2Q8WVK7 121 aaPredicted RBP25.17■■□□□ 1.62
PDCD4-205ENST00000467574 INPP5DQ92835 1189 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 TAAR9Q96RI9 348 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 SPHK1Q9NYA1 384 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 OR6C2Q9NZP2 312 aa25.17■■□□□ 1.62
PDCD4-205ENST00000467574 CORO1CQ9ULV4 474 aaPredicted RBP25.17■■□□□ 1.62
PDCD4-205ENST00000467574 SPTBP11277 2137 aa25.16■■□□□ 1.62
PDCD4-205ENST00000467574 GSAPA4D1B5 854 aa25.16■■□□□ 1.62
PDCD4-205ENST00000467574 CHRM5P08912 532 aaPredicted RBP25.16■■□□□ 1.62
PDCD4-205ENST00000467574 CD9P21926 228 aa25.16■■□□□ 1.62
PDCD4-205ENST00000467574 PEBP1P30086 187 aaKnown RBP25.16■■□□□ 1.62
PDCD4-205ENST00000467574 EIF2S3P41091 472 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms