RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MTUS1Q9ULD2 1270 aa3.75□□□□□ -1.81
SMC4-207ENST00000467263 WBP11Q9Y2W2 641 aaKnown RBP3.75□□□□□ -1.81
SMC4-207ENST00000467263 GRIP1Q9Y3R0 1128 aa3.75□□□□□ -1.81
SMC4-207ENST00000467263 PYGO1Q9Y3Y4 419 aa3.75□□□□□ -1.81
SMC4-207ENST00000467263 ZNF541Q9H0D2 1346 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 LOC100509620A0A075B734 347 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 EDN1P05305 212 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 CA4P22748 312 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 PDX1P52945 283 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 B3GALT5-AS1P59052 145 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 BHLHB9Q6PI77 547 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 ZNF497Q6ZNH5 498 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 TMEM139Q8IV31 216 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 ZNF595Q8IYB9 648 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 MAPKAPK5-AS1Q8N8E1 139 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 HCAR2Q8TDS4 363 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 IRGQQ8WZA9 623 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 ZNF622Q969S3 477 aaKnown RBP eCLIP3.74□□□□□ -1.817e-11■■■□□ 14.9
SMC4-207ENST00000467263 PTERQ96BW5 349 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 ABHD1Q96SE0 405 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 BTBD10Q9BSF8 475 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 C2orf42Q9NWW7 574 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 NSMCE4AQ9NXX6 385 aa3.74□□□□□ -1.81
SMC4-207ENST00000467263 LOC101059948A0A1B0GTJ6 334 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 A0A1W2PN81 502 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 MEIS2O14770 477 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 OR10H2O60403 315 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 TSPAN1O60635 241 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 PRKRAO75569 313 aaKnown RBP3.73□□□□□ -1.81
SMC4-207ENST00000467263 PGM3O95394 542 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 OR2T7P0C7T2 308 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 EFNA1P20827 205 aaPredicted RBP3.73□□□□□ -1.81
SMC4-207ENST00000467263 KRT2P35908 639 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 CHRNA7P36544 502 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 PRKG2Q13237 762 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 RNASEH2BQ5TBB1 312 aaKnown RBP3.73□□□□□ -1.81
SMC4-207ENST00000467263 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 MINDY1Q8N5J2 469 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 TMEM178AQ8NBL3 297 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 OR4C3Q8NH37 302 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 TMCO6Q96DC7 493 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 MS4A10Q96PG2 267 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 ASCL2Q99929 193 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 GOLPH3LQ9H4A5 285 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 FGF22Q9HCT0 170 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMC4-207ENST00000467263 SDR39U1Q9NRG7 319 aaPredicted RBP3.73□□□□□ -1.81
SMC4-207ENST00000467263 B3GAT1Q9P2W7 334 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 CHORDC1Q9UHD1 332 aaPredicted RBP3.73□□□□□ -1.81
SMC4-207ENST00000467263 DAPK2Q9UIK4 370 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 SNX8Q9Y5X2 465 aa3.73□□□□□ -1.81
SMC4-207ENST00000467263 IGHV4-4A0A075B6R2 117 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 IGKV3D-15A0A087WSY6 115 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 FEZF1A0PJY2 475 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 SH2B2O14492 632 aaPredicted RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 CDC123O75794 336 aaPredicted RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 TOMM70O94826 608 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 WDPCPO95876 746 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 RAF1P04049 648 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 TPOP07202 933 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 FAM157CP0CG43 387 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 RNF224P0DH78 156 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 PTPN3P26045 913 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 SLC6A6P31641 620 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 CASP2P42575 452 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 SNRPD1P62314 119 aaKnown RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 TUBB2AQ13885 445 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 TAF13Q15543 124 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 SNAPC1Q16533 368 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 ADAMTSL4-AS1Q5T5F5 129 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 ZNF772Q68DY9 489 aaPredicted RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 PWWP2BQ6NUJ5 590 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 DNAAF5Q86Y56 855 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 CDK20Q8IZL9 346 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 NPEPL1Q8NDH3 523 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 OR2T11Q8NH01 316 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 EXD1Q8NHP7 514 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 HPSE2Q8WWQ2 592 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 ZNF653Q96CK0 615 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 NXNL1Q96CM4 212 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 GMPPAQ96IJ6 420 aaPredicted RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 GCNAQ96QF7 691 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 TUBB2BQ9BVA1 445 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 NUP85Q9BW27 656 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 KLHL4Q9C0H6 718 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 EQTNQ9NQ60 294 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 FLRT3Q9NZU0 649 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 CPSF2Q9P2I0 782 aaKnown RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 CACNG4Q9UBN1 327 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 ZDHHC2Q9UIJ5 367 aa3.72□□□□□ -1.81
SMC4-207ENST00000467263 PPIEQ9UNP9 301 aaKnown RBP3.72□□□□□ -1.81
SMC4-207ENST00000467263 MEIOCA2RUB1 952 aa3.71□□□□□ -1.82
SMC4-207ENST00000467263 GLOD5A6NK44 160 aa3.71□□□□□ -1.82
SMC4-207ENST00000467263 IPO8O15397 1037 aaKnown RBP3.71□□□□□ -1.82
SMC4-207ENST00000467263 ADAM20O43506 726 aa3.71□□□□□ -1.82
SMC4-207ENST00000467263 AP2A2O94973 939 aa3.71□□□□□ -1.82
SMC4-207ENST00000467263 SLC9A3P48764 834 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms