RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KPNA2P52292 529 aaKnown RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 AP1S2P56377 157 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 CDKL1Q00532 357 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 DLG1Q12959 904 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 CSHL1Q14406 222 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 KRT33BQ14525 404 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 ACAP2Q15057 778 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PPP1R3AQ16821 1122 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PPM1JQ5JR12 505 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 DUS1LQ6P1R4 473 aaKnown RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 KLC3Q6P597 504 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 UBE2R2Q712K3 238 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PHC3Q8NDX5 983 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 OR5AR1Q8NGP9 310 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 GPR78Q96P69 363 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 FERD3LQ96RJ6 166 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RAB11FIP5Q9BXF6 653 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 TWSG1Q9GZX9 223 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 STMN4Q9H169 189 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 VPS11Q9H270 941 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RDH14Q9HBH5 336 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PARVBQ9HBI1 364 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 LRIT1Q9P2V4 623 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RUVBL2Q9Y230 463 aaKnown RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RNF215Q9Y6U7 377 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 COL27A1Q8IZC6 1860 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 A0A1W2PPM1 405 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 GOLGA6L10A6NI86 522 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 RHPN2P1A8MT19 583 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 AGPSO00116 658 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 BTN3A1O00481 513 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 MYZAPP0CAP1 466 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ERGP11308 486 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 MAP4P27816 1152 aaKnown RBP14.77□□□□□ -0.05
NPHP4-205ENST00000466897 DAB2P98082 770 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 IRF9Q00978 393 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 SLC18A2Q05940 514 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ILKQ13418 452 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 BIRC2Q13490 618 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 GPR18Q14330 331 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 GRB7Q14451 532 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ARHGAP19Q14CB8 494 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.77□□□□□ -0.05
NPHP4-205ENST00000466897 CDKL4Q5MAI5 379 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ISCA2Q86U28 154 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 SPNS2Q8IVW8 549 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 CFAP61Q8NHU2 1237 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 MCOLN3Q8TDD5 553 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 KCTD4Q8WVF5 259 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 DLG3Q92796 817 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ALKBH8Q96BT7 664 aaKnown RBP14.77□□□□□ -0.05
NPHP4-205ENST00000466897 CAMK1GQ96NX5 476 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 MENTQ9BUN1 341 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 SLC32A1Q9H598 525 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 PCMTD2Q9NV79 361 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 SPATA7Q9P0W8 599 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 DCDC2Q9UHG0 476 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ADAMTS6Q9UKP5 1117 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 OARD1Q9Y530 152 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ACTL7BQ9Y614 415 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 ASXL3Q9C0F0 2248 aa14.77□□□□□ -0.05
NPHP4-205ENST00000466897 DMXL1Q9Y485 3027 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 TRBV23OR9-2A0A075B6M9 112 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 NPEPPSL1A6NEC2 478 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 CDC7O00311 574 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 DYNC1I1O14576 645 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 KERAO60938 352 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 GLRA3O75311 464 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 PYGBP11216 843 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 KRT4P19013 534 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 SHMT2P34897 504 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 HSD17B2P37059 387 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 ACADVLP49748 655 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 RAB28P51157 221 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 GPLD1P80108 840 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 SQSTM1Q13501 440 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 TSNQ15631 228 aaKnown RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 GUSBP11Q6P575 273 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 PLD6Q8N2A8 252 aaKnown RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 RAB42Q8N4Z0 105 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 OR52E1Q8NGJ3 308 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 OR9A1PQ8NGU1 263 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 HMGCLL1Q8TB92 370 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 STAG3L4Q8TBR4 150 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 CCDC74AQ96AQ1 378 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 PTERQ96BW5 349 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 NXNL1Q96CM4 212 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 TSNARE1Q96NA8 513 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 SLC38A3Q99624 504 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 HGH1Q9BTY7 390 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 TRIM54Q9BYV2 358 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 SSU72Q9NP77 194 aaKnown RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 OR6C2Q9NZP2 312 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 TSR3Q9UJK0 312 aaKnown RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 IKZF3Q9UKT9 509 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 CDV3Q9UKY7 258 aaKnown RBP14.76□□□□□ -0.05
NPHP4-205ENST00000466897 PDE10AQ9Y233 779 aa14.76□□□□□ -0.05
NPHP4-205ENST00000466897 PCDHGA1Q9Y5H4 931 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms