RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 STX6O43752 255 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 CTSVO60911 334 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 GBAP04062 536 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 ALDH3A2P51648 485 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 TUBB2AQ13885 445 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 UGCGQ16739 394 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 FAM174BQ3ZCQ3 159 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 SYT14P1Q58G82 188 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 C11orf63Q6NUN7 778 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 SPSB3Q6PJ21 355 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 KCTD8Q6ZWB6 473 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 DNAJB7Q7Z6W7 309 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 TMPRSS11BQ86T26 416 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 FAM9BQ8IZU0 186 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 JAKMIP1Q96N16 626 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 TUBB2BQ9BVA1 445 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 ARRDC1-AS1Q9H2J1 176 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 FZD8Q9H461 694 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 CDH20Q9HBT6 801 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 XAB2Q9HCS7 855 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 OLFML3Q9NRN5 406 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 SLC38A7Q9NVC3 462 aa4.11□□□□□ -1.75
CDC42BPA-211ENST00000466538 A0A1W2PRB8 838 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 PLSCR5A0PG75 271 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 OR6C76A6NM76 312 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 E9PI62 339 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 SLU7O95391 586 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 CSN3P07498 182 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZFYP08048 801 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 PLA2G4BP0C869 781 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 MUTP22033 750 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 MPZP25189 248 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ATP5DP30049 168 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 TNNT3P45378 269 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 MAPK12P53778 367 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 CUL3Q13618 768 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ITGA7Q13683 1181 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ACCSLQ4AC99 568 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 CCNYL2Q5T2Q4 361 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 MPP7Q5T2T1 576 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 FAM91A1Q658Y4 838 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZNF852Q6ZMS4 543 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZNF517Q6ZMY9 492 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 DSG4Q86SJ6 1040 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 FAM114A1Q8IWE2 563 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 SIX6OS1Q8N1H7 587 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 CRYBG2Q8N1P7 616 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 ARHGAP24Q8N264 748 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 TRIML1Q8N9V2 468 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 GDAP1Q8TB36 358 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 KCNE4Q8WWG9 221 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 IRGQQ8WZA9 623 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 SYN2Q92777 582 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 WACQ9BTA9 647 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 FN3KQ9H479 309 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 COPS7BQ9H9Q2 264 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 LRRC4Q9HBW1 653 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 Q9N2K0 584 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 SPHK1Q9NYA1 384 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 POLLQ9UGP5 575 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 LEF1Q9UJU2 399 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 TRIM17Q9Y577 477 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 POMT1Q9Y6A1 747 aa4.1□□□□□ -1.75
CDC42BPA-211ENST00000466538 GAPDHSO14556 408 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 AP5Z1O43299 807 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 MOCS3O95396 460 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 VIMP08670 466 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ACP2P11117 423 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 FGF5P12034 268 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 EPCAMP16422 314 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ADRA2CP18825 462 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 CYP11B2P19099 503 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 CD22P20273 847 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ACAT1P24752 427 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 TLX1P31314 330 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 HSD17B3P37058 310 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 FMO5P49326 533 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 THOP1P52888 689 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 CX3CL1P78423 397 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 DLK1P80370 383 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 MZT1Q08AG7 82 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 FHL1Q13642 323 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 SIRPB2Q5JXA9 342 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 SHEQ5VZ18 495 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZNF324BQ6AW86 544 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 SHQ1Q6PI26 577 aaKnown RBP4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ENPP7Q6UWV6 458 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 FOXL2NBQ6ZUU3 175 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 NUP54Q7Z3B4 507 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZNF554Q86TJ5 538 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 C4orf19Q8IY42 314 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 POC1AQ8NBT0 407 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 NPEPL1Q8NDH3 523 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 OR13J1Q8NGT2 312 aa4.09□□□□□ -1.75
CDC42BPA-211ENST00000466538 OCC1Q8TAD7 63 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms