RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 UBTFL6P0CB48 400 aaPredicted RBP18.2■□□□□ 0.5
CAPN3-209ENST00000466222 CD6P30203 668 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 PEX19P40855 299 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 PRLHRP49683 370 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 TPRG1LQ5T0D9 272 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 OGFRL1Q5TC84 451 aaPredicted RBP18.2■□□□□ 0.5
CAPN3-209ENST00000466222 CYHR1Q6ZMK1 362 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 AFAP1L2Q8N4X5 818 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 NKAPQ8N5F7 415 aaKnown RBP18.2■□□□□ 0.5
CAPN3-209ENST00000466222 BIRC7Q96CA5 298 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 BMFQ96LC9 184 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 MRPL40Q9NQ50 206 aaKnown RBP18.2■□□□□ 0.5
CAPN3-209ENST00000466222 NCKIPSDQ9NZQ3 722 aa18.2■□□□□ 0.5
CAPN3-209ENST00000466222 C10orf142B7Z368 130 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 K7ESF4 209 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 AP2A2O94973 939 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 CXCL12P48061 93 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 PREPP48147 710 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 SIGLEC14Q08ET2 396 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 TRIP10Q15642 601 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 TCHHL1Q5QJ38 904 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 RNF220Q5VTB9 566 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 KLC3Q6P597 504 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 SLC30A9Q6PML9 568 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 XKR5Q6UX68 686 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 RPS27LQ71UM5 84 aaKnown RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 DSELQ8IZU8 1212 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 LSMEM2Q8N112 164 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ZNF483Q8TF39 744 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 FOXJ1Q92949 421 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 PHF21BQ96EK2 531 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 MAELQ96JY0 434 aaKnown RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 WDR55Q9H6Y2 383 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 EFCAB1Q9HAE3 211 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ZBTB26Q9HCK0 441 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 LATS2Q9NRM7 1088 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 UTP6Q9NYH9 597 aaKnown RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 SLC23A2Q9UGH3 650 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ZDHHC2Q9UIJ5 367 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 KRT87PA6NCN2 255 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 NCF1BA6NI72 391 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 NCF1CA8MVU1 366 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 UBXN8O00124 270 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 AIM2O14862 343 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 LATO43561 262 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 NCF1P14598 390 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ATP5F1P24539 256 aaPredicted RBP18.19■□□□□ 0.5
CAPN3-209ENST00000466222 PDHA2P29803 388 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 CCR10P46092 362 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ERFP50548 548 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 SFT2D3Q587I9 215 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 C11orf96Q7Z7L8 435 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 PQLC1Q8N2U9 271 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 ICA1LQ8NDH6 482 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 EDAQ92838 391 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 CENPKQ9BS16 269 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 APOOQ9BUR5 198 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 NUF2Q9BZD4 464 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 KCTD5Q9NXV2 234 aa18.19■□□□□ 0.5
CAPN3-209ENST00000466222 POP7O75817 140 aaKnown RBP18.18■□□□□ 0.5
CAPN3-209ENST00000466222 MTHFD2P13995 350 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 PEX2P28328 305 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 EPHA3P29320 983 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 HK3P52790 923 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 PIGGQ5H8A4 983 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 GALNT15Q8N3T1 639 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 AGR3Q8TD06 166 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 KIAA1191Q96A73 305 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 ATOH8Q96SQ7 321 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 CCM2Q9BSQ5 444 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 C1QTNF7Q9BXJ2 289 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 Q9H521 79 aa18.18■□□□□ 0.5
CAPN3-209ENST00000466222 ZNF106Q9H2Y7 1883 aaKnown RBP18.18■□□□□ 0.5
CAPN3-209ENST00000466222 VEGFDO43915 354 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ZNF217O75362 1048 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 SORBS2O94875 1100 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 RBP1P09455 135 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 HNRNPA2B1P22626 353 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 DGKAP23743 735 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 MAPRE2Q15555 327 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 TCEA2Q15560 299 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ZNF423Q2M1K9 1284 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 ZNF658BQ4V348 819 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 LPCAT4Q643R3 524 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 KIAA0895LQ68EN5 471 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 CEP70Q8NHQ1 597 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 SKA2Q8WVK7 121 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 TFB2MQ9H5Q4 396 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PAPOLBQ9NRJ5 636 aaKnown RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 DTNAQ9Y4J8 743 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 PLXNA2O75051 1894 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 FRYLO94915 3013 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 LRRC14BA6NHZ5 514 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 A8MT66 165 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 NUAK1O60285 661 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 GPC4O75487 556 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 FTH1P02794 183 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 CEACAM5P06731 702 aa18.17■□□□□ 0.5
CAPN3-209ENST00000466222 MYCLP1P12525 358 aaPredicted RBP18.17■□□□□ 0.5
CAPN3-209ENST00000466222 VCLP18206 1134 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms