RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PDYNP01213 254 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 ANXA5P08758 320 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 FCGR1AP12314 374 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 NFKBIAP25963 317 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 TTLL9Q3SXZ7 439 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 UBE2R2Q712K3 238 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 BPIFB1Q8TDL5 484 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 MCCC1Q96RQ3 725 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 CLK4Q9HAZ1 481 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 MAGEL2Q9UJ55 1249 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 UTS2RQ9UKP6 389 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 PPIL1Q9Y3C6 166 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 SLC28A1O00337 649 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 LDLRP01130 860 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 PGRP06401 933 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 CTSAP10619 480 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 GGT1P19440 569 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 PHC1P78364 1004 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 MAPKAPK3Q16644 382 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 USP39Q53GS9 565 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 PHACTR4Q8IZ21 702 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 C10orf111Q8N326 155 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 FIG4Q92562 907 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 DDX18Q9NVP1 670 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 PTTG2Q9NZH5 202 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 DLGAP4Q9Y2H0 992 aa18.27■□□□□ 0.52
TSPAN4-210ENST00000464987 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.51
TSPAN4-210ENST00000464987 UPK1AO00322 258 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CDH2P19022 906 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ALDH3B2P48448 385 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 BOP1Q14137 746 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CYBRD1Q53TN4 286 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CARD16Q5EG05 197 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 OTUD3Q5T2D3 398 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ENPP6Q6UWR7 440 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SLC22A15Q8IZD6 547 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 RNF175Q8N4F7 328 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SCAMP4Q969E2 229 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 TBCDQ9BTW9 1192 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 THUMPD3Q9BV44 507 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SLC32A1Q9H598 525 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CLMPQ9H6B4 373 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ACTR8Q9H981 624 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 KANSL1LA0AUZ9 987 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 PRAMEF4O60810 478 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CLDN9O95484 217 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 BCKDHAP12694 445 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 CDH1P12830 882 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 TCF3P15923 654 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 AOAHP28039 575 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SLC5A2P31639 672 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 RPS9P46781 194 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SPINT3P49223 89 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 RBBP5Q15291 538 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 NKG7Q16617 165 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ZNF648Q5T619 568 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 PRAMEF9Q5VWM5 478 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 NEK5Q6P3R8 708 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 TTC33Q6PID6 262 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 B3GNT6Q6ZMB0 384 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 METTL3Q86U44 580 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 BEND7Q8N7W2 519 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 KREMEN2Q8NCW0 462 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 OR8J3Q8NGG0 315 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ITFG1Q8TB96 612 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 ITFG2Q969R8 447 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 HAUS8Q9BT25 410 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 LINC00597Q9H2U6 94 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SMPD3Q9NY59 655 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 SLC8A2Q9UPR5 921 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 FADS3Q9Y5Q0 445 aa18.26■□□□□ 0.51
TSPAN4-210ENST00000464987 IGLV3-16A0A075B6K0 115 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 IFRD1O00458 451 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 WDR47O94967 919 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 CXCL14O95715 111 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 ANXA6P08133 673 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 LINC00271P0C7V0 271 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 CYP4F3Q08477 520 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 OR2T12Q8NG77 320 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 FBXO30Q8TB52 745 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 AURKBQ96GD4 344 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 ZBTB18Q99592 522 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 C1orf109Q9NX04 203 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 FAM8A1Q9UBU6 413 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 ZNF639Q9UID6 485 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 CLOCKO15516 846 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 CLTBP09497 229 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 TACR1P25103 407 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 AKT1P31749 480 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 CACHD1Q5VU97 1274 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 TMEM215Q68D42 235 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 PRR23BQ6ZRT6 265 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 ZNF548Q8NEK5 533 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 SELENOMQ8WWX9 145 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 SORCS1Q8WY21 1168 aa18.25■□□□□ 0.51
TSPAN4-210ENST00000464987 P2RY13Q9BPV8 354 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms