RNA–Protein interactions for RNA: ENST00000463877.1

SRSF11-209, Transcript of serine and arginine rich splicing factor 11, human

TSL 2

Gene SRSF11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF11-209	ENST00000463877	TMEM135	Q86UB9	458 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	VRK3	Q8IV63	474 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	GALNT6	Q8NCL4	622 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	LPGAT1	Q92604	370 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	RNF31	Q96EP0	1072 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	NRTN	Q99748	197 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	TRIM56	Q9BRZ2	755 aa	Known RBP	27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	TUBB2B	Q9BVA1	445 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	OR6C2	Q9NZP2	312 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	RNF14	Q9UBS8	474 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	CDYL	Q9Y232	598 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	BTRC	Q9Y297	605 aa		27.58	■■■□□ 2.01
SRSF11-209	ENST00000463877	TK2	O00142	265 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	USP1	O94782	785 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	CHRM3	P20309	590 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	MAGEA3	P43357	314 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	PLEKHS1	Q5SXH7	462 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	UNC5D	Q6UXZ4	953 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	CILP2	Q8IUL8	1156 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	OR8K5	Q8NH50	307 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	WBP1	Q96G27	269 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	SIGLEC10	Q96LC7	697 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	FOPNL	Q96NB1	174 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	KCND1	Q9NSA2	647 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	C20orf96	Q9NUD7	363 aa	Predicted RBP	27.57	■■■□□ 2
SRSF11-209	ENST00000463877	INTS10	Q9NVR2	710 aa	Known RBP	27.57	■■■□□ 2
SRSF11-209	ENST00000463877	IL1RAPL1	Q9NZN1	696 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	PLAGL1	Q9UM63	463 aa		27.57	■■■□□ 2
SRSF11-209	ENST00000463877	LOC101059948	A0A1B0GTJ6	334 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	CCDC188	H7C350	402 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	WT1	P19544	449 aa	Predicted RBP	27.56	■■■□□ 2
SRSF11-209	ENST00000463877	PTGIR	P43119	386 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	ADAR	P55265	1226 aa	Known RBP	27.56	■■■□□ 2
SRSF11-209	ENST00000463877	DR1	Q01658	176 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	GPR19	Q15760	415 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	LONRF1	Q17RB8	773 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	CTSL3P	Q5NE16	218 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	IZUMO3	Q5VZ72	239 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	ZNF470	Q6ECI4	717 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	UNC5B	Q8IZJ1	945 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	CALML6	Q8TD86	181 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	BIRC8	Q96P09	236 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	SYTL2	Q9HCH5	934 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	MRFAP1	Q9Y605	127 aa		27.56	■■■□□ 2
SRSF11-209	ENST00000463877	ZNF891	A8MT65	544 aa	Predicted RBP	27.55	■■■□□ 2
SRSF11-209	ENST00000463877		E5RI56	91 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	CHRM5	P08912	532 aa	Predicted RBP	27.55	■■■□□ 2
SRSF11-209	ENST00000463877	PWWP2B	Q6NUJ5	590 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	SPESP1	Q6UW49	350 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	DCUN1D3	Q8IWE4	304 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	LMNTD2	Q8IXW0	634 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	TTC9	Q92623	222 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	ARHGAP9	Q9BRR9	750 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	PITPNM3	Q9BZ71	974 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	CCDC68	Q9H2F9	335 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	PADI1	Q9ULC6	663 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	27.55	■■■□□ 2
SRSF11-209	ENST00000463877	LOC400499	M0QZD8	3231 aa		27.55	■■■□□ 2
SRSF11-209	ENST00000463877	ZCWPW2	A0A1B0GU75	182 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	ISM1	B1AKI9	464 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	NIPSNAP2	O75323	286 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	PKM	P14618	531 aa	Known RBP	27.54	■■■□□ 2
SRSF11-209	ENST00000463877	ST6GAL1	P15907	406 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	STAT5A	P42229	794 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	CENPU	Q71F23	418 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	TMEM126B	Q8IUX1	230 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	GABPB2	Q8TAK5	448 aa	Predicted RBP	27.54	■■■□□ 2
SRSF11-209	ENST00000463877	SLC45A3	Q96JT2	553 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	TRAPPC9	Q96Q05	1148 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	SLC39A10	Q9ULF5	831 aa		27.54	■■■□□ 2
SRSF11-209	ENST00000463877	UGT2B7	P16662	529 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	PGAM1	P18669	254 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	RAB28	P51157	221 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	CYP4F2	P78329	520 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	KYNU	Q16719	465 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	RAB42	Q8N4Z0	105 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	27.53	■■■□□ 2
SRSF11-209	ENST00000463877	N4BP2L2	Q92802	583 aa	Predicted RBP	27.53	■■■□□ 2
SRSF11-209	ENST00000463877	ZNF501	Q96CX3	271 aa	Predicted RBP	27.53	■■■□□ 2
SRSF11-209	ENST00000463877	KLHL25	Q9H0H3	589 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	FAM169A	Q9Y6X4	670 aa		27.53	■■■□□ 2
SRSF11-209	ENST00000463877	SCRG1	O75711	98 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	TIAF1	O95411	115 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	S1PR4	O95977	384 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	NTRK1	P04629	796 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	ITGB2	P05107	769 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	TPBGL	P0DKB5	382 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	PVR	P15151	417 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	DLST	P36957	453 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	MC1R	Q01726	317 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	DHX9	Q08211	1270 aa	Known RBP	27.52	■■■□□ 2
SRSF11-209	ENST00000463877	CTBP1	Q13363	440 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	KIR2DS3	Q14952	304 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	AGGF1	Q8N302	714 aa	eCLIP	27.52	■■■□□ 2	1e-68	■■□□□ 11.5
SRSF11-209	ENST00000463877	MAGEC3	Q8TD91	643 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	FAM136A	Q96C01	138 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	OR2A14	Q96R47	310 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	FAM167B	Q9BTA0	163 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	NAT9	Q9BTE0	207 aa		27.52	■■■□□ 2
SRSF11-209	ENST00000463877	SLC12A9	Q9BXP2	914 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms