RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CYP2A7P20853 494 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 ALDH3A1P30838 453 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 GGT5P36269 586 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 HALP42357 657 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 BDKRB1P46663 353 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 ATP1A2P50993 1020 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 PRKAA2P54646 552 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 DNAJB13P59910 316 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 KIR2DS5Q14953 304 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 CCDC6Q16204 474 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 CES4AQ5XG92 561 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 DUS1LQ6P1R4 473 aaKnown RBP13.96□□□□□ -0.17
COL6A1-202ENST00000463060 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 DCUN1D3Q8IWE4 304 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 OR9A1PQ8NGU1 263 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 MGARPQ8TDB4 240 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 ZFPM2Q8WW38 1151 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 PATE1Q8WXA2 126 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 RHBDF1Q96CC6 855 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 PKP4Q99569 1192 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 MECRQ9BV79 373 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 C1QTNF3Q9BXJ4 246 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 SMOC1Q9H4F8 434 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 GAREM1Q9H706 876 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 UTP6Q9NYH9 597 aaKnown RBP13.96□□□□□ -0.17
COL6A1-202ENST00000463060 NUDT4Q9NZJ9 180 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 MID2Q9UJV3 735 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 TMCO1Q9UM00 188 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 HEBP2Q9Y5Z4 205 aa13.96□□□□□ -0.17
COL6A1-202ENST00000463060 CFAP20Q9Y6A4 193 aaKnown RBP13.96□□□□□ -0.17
COL6A1-202ENST00000463060 ARID1BQ8NFD5 2236 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-202ENST00000463060 KRT87PA6NCN2 255 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 KHNYNO15037 678 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 YKT6O15498 198 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 SYPP08247 313 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF806P0C7X5 589 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 MYL2P10916 166 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 ERGP11308 486 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 FGF3P11487 239 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 TAC1P20366 129 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 KCNA4P22459 653 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 ALDH18A1P54886 795 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 HHATQ5VTY9 493 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 SULT1C3Q6IMI6 304 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 MBOAT1Q6ZNC8 495 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 DBX2Q6ZNG2 339 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 KLHDC8AQ8IYD2 350 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 LRRC56Q8IYG6 542 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 GPR156Q8NFN8 814 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 MAGEC3Q8TD91 643 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 SLC37A2Q8TED4 501 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 ZDHHC1Q8WTX9 485 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 FBXL8Q96CD0 374 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 CCDC138Q96M89 665 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 FERD3LQ96RJ6 166 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 TRIM54Q9BYV2 358 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 TRIT1Q9H3H1 467 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 SLC40A1Q9NP59 571 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 IMP3Q9NV31 184 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 INTS9Q9NV88 658 aaKnown RBP13.95□□□□□ -0.18
COL6A1-202ENST00000463060 CD274Q9NZQ7 290 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 OGFRQ9NZT2 677 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 POLG2Q9UHN1 485 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 DMDP11532 3685 aa13.95□□□□□ -0.18
COL6A1-202ENST00000463060 TRBV23OR9-2A0A075B6M9 112 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SUPT3HB4E1H0 165 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 STX16O14662 325 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 PCDHGA12O60330 932 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 TRIM13O60858 407 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SMIM24O75264 130 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SUPT3HO75486 399 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 CER1O95813 267 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 GUCA1CO95843 209 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SLC16A8O95907 504 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 RPN2P04844 631 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ANXA6P08133 673 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ANXA5P08758 320 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 HIST1H2AGP0C0S8 130 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF883P0CG24 379 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SLC2A4P14672 509 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ENGP17813 658 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 HIST1H2ADP20671 130 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 IMPDH1P20839 514 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 NDUFS1P28331 727 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 IMPA1P29218 277 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 FASLGP48023 281 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SLC6A12P48065 614 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 HNMTP50135 292 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 PRKG2Q13237 762 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL6A1-202ENST00000463060 PFKFB4Q16877 469 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 DEFB133Q30KQ1 61 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 C18orf21Q32NC0 220 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-202ENST00000463060 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms