RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CNDP1Q96KN2 507 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 LINC00615Q96LM1 132 aaPredicted RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 AGAP4Q96P64 663 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 AP1M1Q9BXS5 423 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 LHPPQ9H008 270 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 ENKD1Q9H0I2 346 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 SLC26A1Q9H2B4 701 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 MCCC2Q9HCC0 563 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 ENAMQ9NRM1 1142 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 DHCR7Q9UBM7 475 aaKnown RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 SUCOQ9UBS9 1254 aaKnown RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 ACSL5Q9ULC5 683 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 DYRK1BQ9Y463 629 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 AP1M2Q9Y6Q5 423 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 SCINQ9Y6U3 715 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 JMJD1CQ15652 2540 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 FAM221AA4D161 298 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 LGALS16A8MUM7 142 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 TMCO5BA8MYB1 307 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 KCNK1O00180 336 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 DDX3XO00571 662 aaKnown RBP eCLIP7.42□□□□□ -1.224e-9■□□□□ 10.1
SMC3-202ENST00000462899 CCL21O00585 134 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 WISP2O76076 250 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 KLHL18O94889 574 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 SLC4A1P02730 911 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 FERP16591 822 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 IGFBP2P18065 325 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 MST1P26927 711 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 NDUFS1P28331 727 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 TNFSF10P50591 281 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 PRKAA1Q13131 559 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 SLC9A5Q14940 896 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 DEFB110Q30KQ9 67 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 NKAIN1Q4KMZ8 207 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 BCL7AQ4VC05 210 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 CT47A1Q5JQC4 288 aaPredicted RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 LDLRAP1Q5SW96 308 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 GPRC6AQ5T6X5 926 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 C1orf189Q5VU69 101 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ARMC6Q6NXE6 501 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 C19orf47Q8N9M1 422 aaKnown RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 ACVR1CQ8NER5 493 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 NEK11Q8NG66 645 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 PSMF1Q92530 271 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 FKBP10Q96AY3 582 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ZNF837Q96EG3 531 aaPredicted RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 LMF1Q96S06 567 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 SPOCK3Q9BQ16 436 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 MESP1Q9BRJ9 268 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ZNF670Q9BS34 389 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 GPR63Q9BZJ6 419 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ZCCHC2Q9C0B9 1178 aaKnown RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 SPRTNQ9H040 489 aaPredicted RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 KLHL25Q9H0H3 589 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ISCUQ9H1K1 167 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 TFB2MQ9H5Q4 396 aaKnown RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 EPS8L2Q9H6S3 715 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 WDR54Q9H977 334 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 BPIFA1Q9NP55 256 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 HAUS2Q9NVX0 235 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 IL17CQ9P0M4 197 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ABI3Q9P2A4 366 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 IFT80Q9P2H3 777 aaPredicted RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 NDOR1Q9UHB4 597 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 FN1P02751 2386 aaKnown RBP7.42□□□□□ -1.22
SMC3-202ENST00000462899 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 COL6A5A8TX70 2615 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 ZANQ9Y493 2812 aa7.42□□□□□ -1.22
SMC3-202ENST00000462899 PHF3Q92576 2039 aaKnown RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 HEATR5BQ9P2D3 2071 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 TRGV8A0A0C4DH27 118 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 A0A1B0GTH6 734 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 A0A1W2PQ72 361 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 GSAPA4D1B5 854 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 KLHL33A6NCF5 533 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 CDK2AP1O14519 115 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 ZSCAN9O15535 394 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A9O60656 530 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 FAM155BO75949 473 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 OR2B3O76000 313 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 NDST3O95803 873 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 MT-CYBP00156 380 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A6P19224 532 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A1P22309 533 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A4P22310 534 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 MSX1P28360 303 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 PBLDP30039 288 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 SPAM1P38567 509 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 PRKCIP41743 596 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 TMPRSS15P98073 1019 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 TLE4Q04727 773 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 PIGHQ14442 188 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 ASIC2Q16515 512 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 NKG7Q16617 165 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 DBN1Q16643 649 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 SPESP1Q6UW49 350 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms