RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 OR2AG2A6NM03 316 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CPNE3O75131 537 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 VPS4BO75351 444 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 AGFG2O95081 481 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CAPN1P07384 714 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 MTHFD1P11586 935 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ITGALP20701 1170 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ACRV1P26436 265 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 AKT1P31749 480 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 FNTAP49354 379 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 PRLHRP49683 370 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 VPS41P49754 854 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 TUBB4BP68371 445 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CRADDP78560 199 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 BASP1P80723 227 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ABRQ12979 859 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 TUBB2AQ13885 445 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 GTF2H3Q13889 308 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 NFE2L1Q14494 772 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 GPR19Q15760 415 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 DBN1Q16643 649 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF789Q5FWF6 425 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 FHL5Q5TD97 284 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 PRAMEF17Q5VTA0 474 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 FAM69BQ5VUD6 431 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 IZUMO3Q5VZ72 239 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 LCN10Q6JVE6 187 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CYB5D1Q6P9G0 228 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMEM220Q6QAJ8 160 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 FAM198BQ6UWH4 519 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 C4orf22Q6V702 233 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 PPP1R21Q6ZMI0 780 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 DET1Q7L5Y6 550 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 SERPINA9Q86WD7 417 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 KMT5CQ86Y97 462 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 LILRA3Q8N6C8 439 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 BEND7Q8N7W2 519 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 DNAAF3Q8N9W5 541 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 GDAP1Q8TB36 358 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 SSC4DQ8WTU2 575 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 THAP4Q8WY91 577 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 MAGOHBQ96A72 148 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 LINC00615Q96LM1 132 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 SLC25A23Q9BV35 468 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 TUBB2BQ9BVA1 445 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZCCHC2Q9C0B9 1178 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ING2Q9H160 280 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 KCND1Q9NSA2 647 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZDHHC3Q9NYG2 299 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CRLS1Q9UJA2 301 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 VPS4AQ9UN37 437 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 PSMD13Q9UNM6 376 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 BTRCQ9Y297 605 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 CFAP20Q9Y6A4 193 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 HEATR5BQ9P2D3 2071 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 HEATR9A2RTY3 570 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 TCP11X1B4DZS4 312 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 E7EVH7 732 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 SCRG1O75711 98 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 POP7O75817 140 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 GOT2P00505 430 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 KRT14P02533 472 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 TCP1P17987 556 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 VCLP18206 1134 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 MSH3P20585 1137 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ADRA1DP25100 572 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 MSNP26038 577 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ARNTP27540 789 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 PBLDP30039 288 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 RORAP35398 523 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 HALP42357 657 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 LMAN1P49257 510 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 KPNA2P52292 529 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 TERF1P54274 439 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 SESN2P58004 480 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 GNG11P61952 73 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 HSD11B2P80365 405 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ACY1Q03154 408 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CACNG1Q06432 222 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 GPS1Q13098 491 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 MRPL49Q13405 166 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 SEMA3AQ14563 771 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 GPR33Q49SQ1 333 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZRANB3Q5FWF4 1079 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 DNTTIP2Q5QJE6 756 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 FNBP1LQ5T0N5 605 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 JMJD6Q6NYC1 403 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 LRRC8BQ6P9F7 803 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 FBXO38Q6PIJ6 1188 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CCDC137Q6PK04 289 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 AFTPHQ6ULP2 937 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 GSTA5Q7RTV2 222 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CAND1Q86VP6 1230 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 AMZ2Q86W34 360 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 BPHLQ86WA6 291 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 CREG2Q8IUH2 290 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 DSELQ8IZU8 1212 aa7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 AGGF1Q8N302 714 aaeCLIP7.69□□□□□ -1.18
CDC42BPA-210ENST00000462553 MPP5Q8N3R9 675 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms