RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SLC45A3Q96JT2 553 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 TCF12Q99081 682 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 TRIM51Q9BSJ1 452 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 P2RY12Q9H244 342 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 TFB2MQ9H5Q4 396 aaKnown RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 C20orf96Q9NUD7 363 aaPredicted RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 POLG2Q9UHN1 485 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 TSR3Q9UJK0 312 aaKnown RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 POMT2Q9UKY4 750 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 C2orf74A8MZ97 194 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 E5RI56 91 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 H3BMM5 538 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 KPNA5O15131 536 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 MAP3K7O43318 606 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 USP1O94782 785 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ZBTB11O95625 1053 aaPredicted RBP14.92□□□□□ -0.02
VARS-219ENST00000461328 FAM87AP0C7U9 286 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 PRKAR1AP10644 381 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 AOAHP28039 575 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ACADLP28330 430 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 PTGIRP43119 386 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 MAGEA3P43357 314 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ABRQ12979 859 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 LONRF1Q17RB8 773 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 CTSL3PQ5NE16 218 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ZNF605Q86T29 641 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 BPHLQ86WA6 291 aaPredicted RBP14.92□□□□□ -0.02
VARS-219ENST00000461328 CILP2Q8IUL8 1156 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 VRK3Q8IV63 474 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 CARFQ8N187 725 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 EXD3Q8N9H8 876 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 OR5K2Q8NHB8 316 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 STARD8Q92502 1023 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 NRTNQ99748 197 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 CCDC68Q9H2F9 335 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 FGF21Q9NSA1 209 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ACTR10Q9NZ32 417 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 RNF14Q9UBS8 474 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 PLAGL1Q9UM63 463 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 ICKQ9UPZ9 632 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 CRYL1Q9Y2S2 319 aa14.92□□□□□ -0.02
VARS-219ENST00000461328 PIKFYVEQ9Y2I7 2098 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 BTN3A3O00478 584 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 NKX2-8O15522 239 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 TTI1O43156 1089 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 NIPSNAP2O75323 286 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 TIAF1O95411 115 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 ESR1P03372 595 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 MT-ND3P03897 115 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 CCNYL3P0C7X3 344 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 PGAM1P18669 254 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 CHRM3P20309 590 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 DLSTP36957 453 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 BBS9Q3SYG4 887 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 BORAQ6PGQ7 559 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 FBXO38Q6PIJ6 1188 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 TMEM135Q86UB9 458 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 DCUN1D3Q8IWE4 304 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 D2HGDHQ8N465 521 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.91□□□□□ -0.02
VARS-219ENST00000461328 CALML6Q8TD86 181 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 PPM1MQ96MI6 270 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 CATSPER2Q96P56 530 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 FCRL4Q96PJ5 515 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 KRT12Q99456 494 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 FAM167BQ9BTA0 163 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 TRIM31Q9BZY9 425 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 FANCEQ9HB96 536 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 INTS10Q9NVR2 710 aaKnown RBP14.91□□□□□ -0.02
VARS-219ENST00000461328 IL17BQ9UHF5 180 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 CROTQ9UKG9 612 aa14.91□□□□□ -0.02
VARS-219ENST00000461328 FASNP49327 2511 aaKnown RBP14.9□□□□□ -0.02
VARS-219ENST00000461328 ZCWPW2A0A1B0GU75 182 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 PIPSLA2A3N6 862 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 SLC9B1P1A6NJY1 282 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 FANCGO15287 622 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 GPC4O75487 556 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 BANF1O75531 89 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 F7P08709 466 aaPredicted RBP14.9□□□□□ -0.02
VARS-219ENST00000461328 SFTPCP11686 197 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 MC1RQ01726 317 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
VARS-219ENST00000461328 CDC20Q12834 499 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 MORF4L2Q15014 288 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 GPR19Q15760 415 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 PWWP2BQ6NUJ5 590 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 TTC23LQ6PF05 361 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 CENPUQ71F23 418 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 KCNMB4Q86W47 210 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 DENND6AQ8IWF6 608 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 PDIK1LQ8N165 341 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 AGGF1Q8N302 714 aaeCLIP14.9□□□□□ -0.02
VARS-219ENST00000461328 GABPB2Q8TAK5 448 aaPredicted RBP14.9□□□□□ -0.02
VARS-219ENST00000461328 SIGLEC10Q96LC7 697 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 FOPNLQ96NB1 174 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 KLHL25Q9H0H3 589 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 FBXO6Q9NRD1 293 aaPredicted RBP14.9□□□□□ -0.02
VARS-219ENST00000461328 C1GALT1Q9NS00 363 aa14.9□□□□□ -0.02
VARS-219ENST00000461328 KCND1Q9NSA2 647 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms