RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 DEPDC7Q96QD5 511 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 HGH1Q9BTY7 390 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 RAB33BQ9H082 229 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 SYNDIG1Q9H7V2 258 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 ZNF180Q9UJW8 692 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 ASXL3Q9C0F0 2248 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 ACACAQ13085 2346 aa21.84■■□□□ 1.09
C9orf3-209ENST00000460573 RP1P56715 2156 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 EXOC1LA0A1B0GW35 172 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 D6RAR5 112 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 PSIP1O75475 530 aaKnown RBP21.83■■□□□ 1.09
C9orf3-209ENST00000460573 FAM155BO75949 473 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 C1orf105O95561 183 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 CATP04040 527 aaKnown RBP21.83■■□□□ 1.09
C9orf3-209ENST00000460573 STMN1P16949 149 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 MSH2P43246 934 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 SERPINB9P50453 376 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 PRKG2Q13237 762 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 MAP9Q49MG5 647 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 TMEM71Q6P5X7 295 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 TAOK1Q7L7X3 1001 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 PLXDC1Q8IUK5 500 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 MYO1HQ8N1T3 1032 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 OR52E1Q8NGJ3 308 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 EEF1AKMT1Q8WVE0 214 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 HNRNPLLQ8WVV9 542 aaKnown RBP21.83■■□□□ 1.09
C9orf3-209ENST00000460573 PDLIM5Q96HC4 596 aaKnown RBP21.83■■□□□ 1.09
C9orf3-209ENST00000460573 TMEM74Q96NL1 305 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 PAFAH2Q99487 392 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 DKK4Q9UBT3 224 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 FETUBQ9UGM5 382 aa21.83■■□□□ 1.09
C9orf3-209ENST00000460573 CNTFP26441 200 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 SHMT2P34897 504 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 CAPZBP47756 277 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 CAMK2BQ13554 666 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 UAP1Q16222 522 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 NKAIN2Q5VXU1 208 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 USP53Q70EK8 1073 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 CCDC91Q7Z6B0 441 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 OOSP2Q86WS3 158 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 DCBLD1Q8N8Z6 715 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 FBXO15Q8NCQ5 510 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 OR4D9Q8NGE8 314 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 UHMK1Q8TAS1 419 aaKnown RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 AENQ8WTP8 325 aaKnown RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 UBLCP1Q8WVY7 318 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 ASB11Q8WXH4 323 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 ANKRD7Q92527 254 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 NCSTNQ92542 709 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 MRRFQ96E11 262 aaKnown RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 EPB41L4BQ9H329 900 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 SRMSQ9H3Y6 488 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 GPAMQ9HCL2 828 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 EPHA6Q9UF33 1036 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 ATXN7L1Q9ULK2 861 aaPredicted RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 TDRKHQ9Y2W6 561 aaKnown RBP21.82■■□□□ 1.08
C9orf3-209ENST00000460573 NFS1Q9Y697 457 aa21.82■■□□□ 1.08
C9orf3-209ENST00000460573 FAM208BQ5VWN6 2430 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ADAMTS20P59510 1910 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 GFYI3L273 518 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 MATN2O00339 956 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 SLC16A5O15375 505 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ZBTB14O43829 449 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 KRT38O76015 456 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 C8GP07360 202 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ZNF37AP17032 561 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-209ENST00000460573 SP140Q13342 867 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ZKSCAN8Q15776 578 aaPredicted RBP21.81■■□□□ 1.08
C9orf3-209ENST00000460573 LGSNQ5TDP6 509 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 LRRC69Q6ZNQ3 347 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 AMIGO1Q86WK6 493 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 CEP97Q8IW35 865 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 RAB42Q8N4Z0 105 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 OR4E2Q8NGC2 313 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 CAVIN3Q969G5 261 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 LINGO1Q96FE5 620 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 RAB11FIP5Q9BXF6 653 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ZMYND15Q9H091 742 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 PPCSQ9HAB8 311 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 OGFRQ9NZT2 677 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 ASPMQ8IZT6 3477 aa21.81■■□□□ 1.08
C9orf3-209ENST00000460573 SPEGQ15772 3267 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 OR5K3A6NET4 321 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 POC1B-GALNT4F8VUJ3 575 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 TSPAN12O95859 305 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 CAPNS1P04632 268 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 TYRP1P17643 537 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 CRABP2P29373 138 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 RAB10P61026 200 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 ZFP36L1Q07352 338 aaKnown RBP21.8■■□□□ 1.08
C9orf3-209ENST00000460573 PRKAA1Q13131 559 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 TRA2AQ13595 282 aaKnown RBP eCLIP21.8■■□□□ 1.08
C9orf3-209ENST00000460573 ISXQ2M1V0 245 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 COL28A1Q2UY09 1125 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 ARMC6Q6NXE6 501 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 RASGRP3Q8IV61 690 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 ZDHHC12Q96GR4 267 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 NUDT22Q9BRQ3 303 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 NRSN2Q9GZP1 204 aa21.8■■□□□ 1.08
C9orf3-209ENST00000460573 CAB39LQ9H9S4 337 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms