RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 USP22Q9UPT9 525 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 TNPO3Q9Y5L0 923 aaKnown RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 PARNO95453 639 aaKnown RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 OTCP00480 354 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 ZDHHC11BP0C7U3 371 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 HSPA1AP0DMV8 641 aaKnown RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 HSPA1BP0DMV9 641 aaKnown RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 MYCLP1P12525 358 aaPredicted RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 OXA1LQ15070 435 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 CTSL3PQ5NE16 218 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 CACHD1Q5VU97 1274 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 LETMD1Q6P1Q0 360 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 OFCC1Q8IZS5 231 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 BPIFB6Q8NFQ5 453 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 HOPXQ9BPY8 73 aaPredicted RBP15.1■□□□□ 0.01
LMNB1-203ENST00000460265 IL26Q9NPH9 171 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 DGKBQ9Y6T7 804 aa15.1■□□□□ 0.01
LMNB1-203ENST00000460265 CLPXO76031 633 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PGLSO95336 258 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CHRNB1P11230 501 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 NR4A2P43354 598 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 MAPKAPK3Q16644 382 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 AAK1Q2M2I8 961 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SYTL3Q4VX76 610 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PAGE3Q5JUK9 113 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 LRRC66Q68CR7 880 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 USP45Q70EL2 814 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 USP43Q70EL4 1123 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 GOLGA7Q7Z5G4 137 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 STK32CQ86UX6 486 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ZBTB2Q8N680 514 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 KREMEN2Q8NCW0 462 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 FAM110BQ8TC76 370 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 KCNJ9Q92806 393 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PRKAG2Q9UGJ0 569 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CNOT6Q9ULM6 557 aaKnown RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PRSS21Q9Y6M0 314 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 MIA3Q5JRA6 1907 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 DOCK6Q96HP0 2047 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CLDN25C9JDP6 229 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 TRIM24O15164 1050 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SH3BP5O60239 455 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 GPX3P22352 226 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SERPINB1P30740 379 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 HMGCLP35914 325 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 AP1S1P61966 158 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PLEKHG6Q3KR16 790 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 MPPE1Q53F39 396 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ZNF648Q5T619 568 aaPredicted RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CHST9Q7L1S5 443 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CYP2U1Q7Z449 544 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PAWRQ96IZ0 340 aaKnown RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 MAELQ96JY0 434 aaKnown RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 TRIB3Q96RU7 358 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SOX17Q9H6I2 414 aaPredicted RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 FARSBQ9NSD9 589 aaKnown RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 PCTPQ9UKL6 214 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SATB2Q9UPW6 733 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 U3KQV3 271 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 VPS4BO75351 444 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ANXA5P08758 320 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ALOX5P09917 674 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 SPAM1P38567 509 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 GSK3BP49841 420 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 NFATC2Q13469 925 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 FAM174BQ3ZCQ3 159 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 AASDHQ4L235 1098 aaPredicted RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 WDR45BQ5MNZ6 344 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 GLYATQ6IB77 296 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 CERS6Q6ZMG9 384 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 UBE2R2Q712K3 238 aaPredicted RBP15.09■□□□□ 0.01
LMNB1-203ENST00000460265 GPR150Q8NGU9 434 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 LILRB4Q8NHJ6 448 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ELMO1Q92556 727 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 TANKQ92844 425 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 ALPK1Q96QP1 1244 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 TTLL2Q9BWV7 592 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 VN1R3Q9BXE9 311 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 HMG20AQ9NP66 347 aa15.09■□□□□ 0.01
LMNB1-203ENST00000460265 LOC730098B7Z3J9 87 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 TAF4O00268 1085 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 TGM5O43548 720 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 WDR47O94967 919 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 YAP1P46937 504 aaKnown RBP15.08■□□□□ 0.01
LMNB1-203ENST00000460265 HK3P52790 923 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 SLC39A5Q6ZMH5 540 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 TMEM25Q86YD3 366 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 PELI3Q8N2H9 469 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 BEND7Q8N7W2 519 aaPredicted RBP15.08■□□□□ 0.01
LMNB1-203ENST00000460265 OR2AP1Q8NGE2 309 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 ANKRD60Q9BZ19 345 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 RAD21L1Q9H4I0 556 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 TBC1D14Q9P2M4 693 aa15.08■□□□□ 0.01
LMNB1-203ENST00000460265 TBC1D4O60343 1298 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 STK16O75716 305 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 FGF18O76093 207 aa15.08■□□□□ 0
LMNB1-203ENST00000460265 CPSF4O95639 269 aaKnown RBP15.08■□□□□ 0
LMNB1-203ENST00000460265 KCNC4Q03721 635 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms