RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TMEM71Q6P5X7 295 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 TAOK1Q7L7X3 1001 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 DTX1Q86Y01 620 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 RIBC1Q8N443 379 aaPredicted RBP15.22■□□□□ 0.03
SDF4-204ENST00000459994 RASGEF1AQ8N9B8 481 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
SDF4-204ENST00000459994 VPS39Q96JC1 886 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 SARS2Q9NP81 518 aaKnown RBP15.22■□□□□ 0.03
SDF4-204ENST00000459994 EURLQ9NYK6 297 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 PSMC3IPQ9P2W1 217 aaPredicted RBP15.22■□□□□ 0.03
SDF4-204ENST00000459994 CPNE7Q9UBL6 633 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 B3GALT1Q9Y5Z6 326 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 PRSS21Q9Y6M0 314 aa15.22■□□□□ 0.03
SDF4-204ENST00000459994 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.03
SDF4-204ENST00000459994 ERVH48-1M5A8F1 160 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 MAP2K7O14733 419 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 HGSO14964 777 aaPredicted RBP15.21■□□□□ 0.03
SDF4-204ENST00000459994 SGTAO43765 313 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 KALRNO60229 2985 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 FAM155BO75949 473 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 KRT38O76015 456 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
SDF4-204ENST00000459994 OR56A5P0C7T3 313 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 CD9P21926 228 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 RPL10P27635 214 aaKnown RBP15.21■□□□□ 0.03
SDF4-204ENST00000459994 FMO4P31512 558 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 SLC19A1P41440 591 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 CLCNKAP51800 687 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 CTSCP53634 463 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 ZNF844Q08AG5 666 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 INSCQ1MX18 579 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 BCL7AQ4VC05 210 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 ZNF549Q6P9A3 640 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 LRRTM4Q86VH4 590 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 ZNF843Q8N446 348 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 CLDN19Q8N6F1 224 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 BMPERQ8N8U9 685 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 NCSTNQ92542 709 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 TMEM159Q96B96 161 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 GPR22Q99680 433 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 AARSD1Q9BTE6 412 aaKnown RBP15.21■□□□□ 0.03
SDF4-204ENST00000459994 CCDC68Q9H2F9 335 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 PDP2Q9P2J9 529 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
SDF4-204ENST00000459994 BSNQ9UPA5 3926 aa15.21■□□□□ 0.02
SDF4-204ENST00000459994 HMX2A2RU54 273 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 OR52A4PA6NMU1 304 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 EFCAB7A8K855 629 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 KMOO15229 486 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 SNRPAP09012 282 aaKnown RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 GSTM1P09488 218 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 PPM1FP49593 454 aaPredicted RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 PRLHRP49683 370 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 GFERP55789 205 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 CYP4F2P78329 520 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 GPLD1P80108 840 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 POU4F1Q01851 419 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 RHDQ02161 417 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 GSTM4Q03013 218 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 CLCA4Q14CN2 919 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 CLPPQ16740 277 aaPredicted RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 TAF1BQ53T94 588 aaPredicted RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 CTSL3PQ5NE16 218 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 ANKS6Q68DC2 871 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 PTRHD1Q6GMV3 140 aaKnown RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 FAM45BPQ6NSW5 357 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 TMEM220Q6QAJ8 160 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 XKR5Q6UX68 686 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 ARHGAP22Q7Z5H3 698 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 SLC9B2Q86UD5 537 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 OR10G6Q8NH81 332 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 FAM45AQ8TCE6 357 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 EPS8L3Q8TE67 593 aaKnown RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 MTBPQ96DY7 904 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 SGF29Q96ES7 293 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 AHCYL2Q96HN2 611 aaKnown RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 LINC00615Q96LM1 132 aaPredicted RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 CTRCQ99895 268 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 APMAPQ9HDC9 416 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 LGALS13Q9UHV8 139 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 MTO1Q9Y2Z2 717 aaKnown RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 VWA7Q9Y334 891 aa15.2■□□□□ 0.02
SDF4-204ENST00000459994 DNMT3AQ9Y6K1 912 aaPredicted RBP15.2■□□□□ 0.02
SDF4-204ENST00000459994 KIR2DS5A0A0G2JLQ3 304 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 A0A0G2JNG1 304 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 IQANK1A0A1B0GTG1 560 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 FAM95CA0A1B0GW59 222 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TLDC2A0PJX2 215 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 KLHL33A6NCF5 533 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 KIR2DS3K7RE56 304 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TK2O00142 265 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 ATP8B1O43520 1251 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 DUX1O43812 170 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 SLCO1A2P46721 670 aa15.19■□□□□ 0.02
SDF4-204ENST00000459994 TRA2AQ13595 282 aaKnown RBP eCLIP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms