RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 TMEM53Q6P2H8 277 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 NDRG1Q92597 394 aaKnown RBP11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 KCTD7Q96MP8 289 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 GFM1Q96RP9 751 aaKnown RBP11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 IL1RAPQ9NPH3 570 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 PTPRJQ12913 1337 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 DNTTP04053 509 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 C8GP07360 202 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 ITPKAP23677 461 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 MXD1Q05195 221 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 WSCD2Q2TBF2 565 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 ADNP2Q6IQ32 1131 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 CHST15Q7LFX5 561 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 CAND1Q86VP6 1230 aaKnown RBP11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 TOR3AQ9H497 397 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
TRAPPC10-204ENST00000459741 TMEM233B4DJY2 109 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 CCRL2O00421 344 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 SNNO75324 88 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 RNASEH2AO75792 299 aaKnown RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 NRLP54845 237 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 MAB21L1Q13394 359 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 TUSC3Q13454 348 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 SLC10A6Q3KNW5 377 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 PJA1Q8NG27 643 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 KBTBD7Q8WVZ9 684 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 SLC30A2Q9BRI3 323 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 RNF6Q9Y252 685 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 AKAP12Q02952 1782 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 OR6C70A6NIJ9 312 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 MCIDASD6RGH6 385 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 AHSGP02765 367 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 PSKH1P11801 424 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 PRPS1L1P21108 318 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 CPNE9Q8IYJ1 553 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 ALDH16A1Q8IZ83 802 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 VANGL1Q8TAA9 524 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 NEK7Q8TDX7 302 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 PRICKLE1Q96MT3 831 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 FCRL4Q96PJ5 515 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 BCL7BQ9BQE9 202 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 TTLL2Q9BWV7 592 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 OSBPL2Q9H1P3 480 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 DPEP3Q9H4B8 488 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 FAM105AQ9NUU6 356 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 MAT2BQ9NZL9 334 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 SLC27A6Q9Y2P4 619 aa11.21□□□□□ -0.61
TRAPPC10-204ENST00000459741 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 SCN2BO60939 215 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 RLN1P04808 185 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 TM4SF1P30408 202 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 MYBPC1Q00872 1141 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 SPPL2BQ8TCT7 592 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 ZNF354BQ96LW1 612 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 MAPKAP1Q9BPZ7 522 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 ACBD6Q9BR61 282 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 K7EPI3 171 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 INSIG1O15503 277 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 CAMK1Q14012 370 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 DCBLD1Q8N8Z6 715 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 PHC3Q8NDX5 983 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 HAVCR1Q96D42 359 aa11.21□□□□□ -0.62
TRAPPC10-204ENST00000459741 TCAF2A6NFQ2 919 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 CACNB4O00305 520 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 TP73O15350 636 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 NME6O75414 186 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 MTRF1O75570 445 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 SRPRAP08240 638 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 GSTT2BP0CG30 244 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 TACR2P21452 398 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 C2orf80Q0P641 193 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 KBTBD6Q86V97 674 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 ANKRD46Q86W74 232 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 PQLC3Q8N755 202 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 PIGXQ8TBF5 258 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 HMCESQ96FZ2 354 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 SEC14L4Q9UDX3 406 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 BTBD19C9JJ37 291 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 PRLP01236 227 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 T-ENOLP0DO92 83 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 ABHD18Q0P651 414 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 VGLL4Q14135 290 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 OR52E8Q6IFG1 317 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 SIDT2Q8NBJ9 832 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 PYURFQ96I23 114 aa11.2□□□□□ -0.62
TRAPPC10-204ENST00000459741 SLC29A3Q9BZD2 475 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms