RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 BANF1O75531 89 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 PKMP14618 531 aaKnown RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 POLR2CP19387 275 aaPredicted RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 WT1P19544 449 aaPredicted RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 SHMT2P34897 504 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 SLC1A2P43004 574 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 SEPHS1P49903 392 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 KPNA2P52292 529 aaKnown RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 CSE1LP55060 971 aaKnown RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 PRKG2Q13237 762 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 IL11RAQ14626 422 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 HIF1AQ16665 826 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 ZNF789Q5FWF6 425 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 CYB5D1Q6P9G0 228 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 KCNMB4Q86W47 210 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 DENND6AQ8IWF6 608 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 BBOF1Q8ND07 529 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
USP39-208ENST00000455732 WDR70Q9NW82 654 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 KLHL42Q9P2K6 505 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 PILRAQ9UKJ1 303 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 CRYL1Q9Y2S2 319 aa16.82■□□□□ 0.28
USP39-208ENST00000455732 SNRNP200O75643 2136 aaKnown RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 BTN3A3O00478 584 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 BTN3A1O00481 513 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 NIPSNAP2O75323 286 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 ZBTB11O95625 1053 aaPredicted RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 RPL21P46778 160 aaKnown RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 ARL4CP56559 192 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 SH3BP2P78314 561 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 CTBP1Q13363 440 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 HSP90AA5PQ58FG0 334 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 KIAA1614Q5VZ46 1190 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 STEAP4Q687X5 459 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 IGDCC3Q8IVU1 814 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 DCUN1D3Q8IWE4 304 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 CNTN4Q8IWV2 1026 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 ADGRF3Q8IZF5 1079 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 GABPB2Q8TAK5 448 aaPredicted RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 KCNJ9Q92806 393 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 WBP1Q96G27 269 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 WDR83Q9BRX9 315 aaKnown RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 ERP44Q9BS26 406 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 PITPNM3Q9BZ71 974 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 TRIM31Q9BZY9 425 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 PLAC1Q9HBJ0 212 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 FBXO6Q9NRD1 293 aaPredicted RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 C1GALT1Q9NS00 363 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 OR6C2Q9NZP2 312 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 BTRCQ9Y297 605 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 TMEM184BQ9Y519 407 aaPredicted RBP16.81■□□□□ 0.28
USP39-208ENST00000455732 COMMD10Q9Y6G5 202 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 TEX264Q9Y6I9 313 aa16.81■□□□□ 0.28
USP39-208ENST00000455732 HELZ2Q9BYK8 2649 aaKnown RBP16.8■□□□□ 0.28
USP39-208ENST00000455732 C2orf74A8MZ97 194 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 E7ESA3 106 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 RAD51CO43502 376 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 RAD1O60671 282 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 TPBGLP0DKB5 382 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 ELK3P41970 407 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 ATP1A2P50993 1020 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 HSD11B2P80365 405 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 FRG1Q14331 258 aaKnown RBP16.8■□□□□ 0.28
USP39-208ENST00000455732 GALNT7Q86SF2 657 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 UNC5BQ8IZJ1 945 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 D2HGDHQ8N465 521 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 SIDT2Q8NBJ9 832 aaKnown RBP16.8■□□□□ 0.28
USP39-208ENST00000455732 C2CD4AQ8NCU7 369 aaPredicted RBP16.8■□□□□ 0.28
USP39-208ENST00000455732 PWWP2AQ96N64 755 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 OR6C1Q96RD1 312 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 NRTNQ99748 197 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 MENTQ9BUN1 341 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 XKR8Q9H6D3 395 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 WHRNQ9P202 907 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 CDC23Q9UJX2 597 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 SNX24Q9Y343 169 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 PCDHGA4Q9Y5G9 962 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 MRFAP1Q9Y605 127 aa16.8■□□□□ 0.28
USP39-208ENST00000455732 GSAPA4D1B5 854 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 E5RI56 91 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 C1QL1O75973 258 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 STK17BO94768 372 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 DLGAP3O95886 979 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 FGF5P12034 268 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 CHRM3P20309 590 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 PRDX3P30048 256 aaKnown RBP16.79■□□□□ 0.28
USP39-208ENST00000455732 PKLRP30613 574 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 RAB28P51157 221 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 CLCN7P51798 805 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 ACY1Q03154 408 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 CKAP4Q07065 602 aaKnown RBP16.79■□□□□ 0.28
USP39-208ENST00000455732 FOXM1Q08050 763 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 ABRQ12979 859 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 KYNUQ16719 465 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
USP39-208ENST00000455732 DUPD1Q68J44 220 aa16.79■□□□□ 0.28
USP39-208ENST00000455732 ZNF549Q6P9A3 640 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms