RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CPSF2Q9P2I0 782 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-202ENST00000455220 B4DGG1 531 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 PROB1E7EW31 1015 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 G3V2L1 256 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 KLK8O60259 260 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 NOBOXO60393 691 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 NDUFS1P28331 727 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 RPIAP49247 311 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 GRB7Q14451 532 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 CDKL4Q5MAI5 379 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 C6orf132Q5T0Z8 1188 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 FRA10AC1Q70Z53 315 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 SFTPA2Q8IWL1 248 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 PDPRQ8NCN5 879 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 PHC3Q8NDX5 983 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 ARMC2Q8NEN0 867 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 SLC37A2Q8TED4 501 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 PATE1Q8WXA2 126 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 GTPBP2Q9BX10 602 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 TRIM54Q9BYV2 358 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 NKIRAS1Q9NYS0 192 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 NLGN3Q9NZ94 848 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 NUDT4Q9NZJ9 180 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 MID2Q9UJV3 735 aa16.15■□□□□ 0.18
CCDC90B-202ENST00000455220 UBXN8O00124 270 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 FFAR2O15552 330 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 HIST1H2AGP0C0S8 130 aaPredicted RBP16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 HIST1H2ADP20671 130 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 MAP4P27816 1152 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 CCSMST1Q4G0I0 132 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 ZYG11AQ6WRX3 759 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 GATAD2AQ86YP4 633 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 ANKRD42Q8N9B4 389 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 AVL9Q8NBF6 648 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 GPR156Q8NFN8 814 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 ZFPM2Q8WW38 1151 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 RAD51AP1Q96B01 352 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 CXorf40BQ96DE9 158 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 HIST1H2AHQ96KK5 128 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 FERD3LQ96RJ6 166 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 HIST1H2AJQ99878 128 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 H2AFJQ9BTM1 129 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 DNAAF2Q9NVR5 837 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 UTP6Q9NYH9 597 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 COPG2Q9UBF2 871 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 CPNE7Q9UBL6 633 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 POLG2Q9UHN1 485 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 COLEC10Q9Y6Z7 277 aa16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 GOLGA4Q13439 2230 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-202ENST00000455220 TPBGLP0DKB5 382 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 FASLGP48023 281 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ATXN3P54252 364 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 WDR4P57081 412 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 NFKB2Q00653 900 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SF3A2Q15428 464 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CSRP2Q16527 193 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 TTC23LQ6PF05 361 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC9B2Q86UD5 537 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CCDC63Q8NA47 563 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 OR9A1PQ8NGU1 263 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 OR4C6Q8NH72 309 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 MAPK15Q8TD08 544 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CCDC138Q96M89 665 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 HGH1Q9BTY7 390 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 MENTQ9BUN1 341 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 DUSP23Q9BVJ7 150 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 KIR3DX1Q9H7L2 352 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CNOT10Q9H9A5 744 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC40A1Q9NP59 571 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SEMA4GQ9NTN9 838 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ARL15Q9NXU5 204 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 NCDNQ9UBB6 729 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 TMCO1Q9UM00 188 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 HCN4Q9Y3Q4 1203 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 PCDHGB2Q9Y5G2 931 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 TRBV23OR9-2A0A075B6M9 112 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 PRAMEF33A0A0G2JMD5 474 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 A8MT66 165 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SUPT3HB4E1H0 165 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 DLX3O60479 287 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SUPT3HO75486 399 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ANXA5P08758 320 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 MYL2P10916 166 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ERGP11308 486 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CPA3P15088 417 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 TAC1P20366 129 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ATP5F1P24539 256 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 OAS2P29728 719 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 SERPINB4P48594 390 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 PCLAFQ15004 111 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 MBOAT1Q6ZNC8 495 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 RBM12BQ8IXT5 1001 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ARL14Q8N4G2 192 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ARFGAP2Q8N6H7 521 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 ARL10Q8N8L6 244 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 MDM1Q8TC05 714 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 EXT2Q93063 718 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 RHBDF1Q96CC6 855 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms