RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BIRC5O15392 142 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 FFAR2O15552 330 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 KDM1AO60341 852 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SNX2O60749 519 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SDC3O75056 442 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HIST1H2AGP0C0S8 130 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ALPPL2P10696 532 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HIST1H2ADP20671 130 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 GGT5P36269 586 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HSD17B2P37059 387 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 GLRBP48167 497 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 RPIAP49247 311 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HNMTP50135 292 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 NR1D2Q14995 579 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SEPT7Q16181 437 aaKnown RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ZCCHC8Q6NZY4 707 aaKnown RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 C16orf46Q6P387 395 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 TTC23LQ6PF05 361 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ZYG11AQ6WRX3 759 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 MTERF4Q7Z6M4 381 aaKnown RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SLC9B2Q86UD5 537 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 GPSM1Q86YR5 675 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 KLHDC8AQ8IYD2 350 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 TCAIMQ8N3R3 496 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ARFGAP2Q8N6H7 521 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ARL10Q8N8L6 244 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 OR9A1PQ8NGU1 263 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SLC37A2Q8TED4 501 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 UBTD2Q8WUN7 234 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SKA2Q8WVK7 121 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ZBTB9Q96C00 473 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 FBXL8Q96CD0 374 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 CCDC126Q96EE4 140 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 FAM111AQ96PZ2 611 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 RAB11FIP5Q9BXF6 653 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 CNOT10Q9H9A5 744 aaKnown RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SLC40A1Q9NP59 571 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 FSCN3Q9NQT6 498 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 SEMA4GQ9NTN9 838 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 NCKIPSDQ9NZQ3 722 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 COPG2Q9UBF2 871 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 CPNE7Q9UBL6 633 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 RNF112Q9ULX5 631 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 ADAMTS9Q9P2N4 1935 aa10.95□□□□□ -0.66
TRAF4-206ENST00000454852 COL5A1P20908 1838 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-206ENST00000454852 TDRD6O60522 2096 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ARHGEF17Q96PE2 2063 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 FAM221BA6H8Z2 402 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 CDX4O14627 284 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 IPO13O94829 963 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ANXA5P08758 320 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 TPBGLP0DKB5 382 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 TAC1P20366 129 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 NR1D1P20393 614 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ATP5F1P24539 256 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 MAP4P27816 1152 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 PRKAA2P54646 552 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ALDH18A1P54886 795 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 DNAJB13P59910 316 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 NAA20P61599 178 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SUZ12Q15022 739 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 CYP2A13Q16696 494 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 C14orf28Q4W4Y0 310 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SULT1C3Q6IMI6 304 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 TCEAL6Q6IPX3 200 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ZNF438Q7Z4V0 828 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SLC22A9Q8IVM8 553 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 LRRC56Q8IYG6 542 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ARL14Q8N4G2 192 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 OR6C4Q8NGE1 309 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 OR5AR1Q8NGP9 310 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 OR6Y1Q8NGX8 325 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 MAPK15Q8TD08 544 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 ATL1Q8WXF7 558 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 TCEAL3Q969E4 200 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SH3KBP1Q96B97 665 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 RHBDF1Q96CC6 855 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 CXorf40BQ96DE9 158 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SCYL1Q96KG9 808 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 CAMK1GQ96NX5 476 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 UNKQ9C0B0 810 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SMOC1Q9H4F8 434 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 KCNK9Q9NPC2 374 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 IMP3Q9NV31 184 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 FAM86C1Q9NVL1 165 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 NKIRAS1Q9NYS0 192 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 SLC17A7Q9P2U7 560 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 NCDNQ9UBB6 729 aa10.94□□□□□ -0.66
TRAF4-206ENST00000454852 PTBP2Q9UKA9 531 aaKnown RBP10.94□□□□□ -0.66
TRAF4-206ENST00000454852 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 LILRA5A6NI73 299 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 ZNF839A8K0R7 811 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 A8MT66 165 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 B4DGG1 531 aa10.93□□□□□ -0.66
TRAF4-206ENST00000454852 TRIM38O00635 465 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms