RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RBL1P28749 1068 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MC4RP32245 332 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TNNT3P45378 269 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GABRA4P48169 554 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ST13P50502 369 aaKnown RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RRADP55042 308 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RIPPLY3P57055 190 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MSLNQ13421 630 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ELOAQ14241 798 aaKnown RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KCTD19Q17RG1 926 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ASTE1Q2TB18 679 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NKAIN1Q4KMZ8 207 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ODF2Q5BJF6 829 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AADACL2Q6P093 401 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LINC00696Q6ZRV3 163 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ARHGEF18Q6ZSZ5 1173 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MED25Q71SY5 747 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 COX15Q7KZN9 410 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PID1Q7Z2X4 250 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AMIGO1Q86WK6 493 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TICAM1Q8IUC6 712 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPNS2Q8IVW8 549 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPR135Q8IZ08 494 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SHISA5Q8N114 240 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR2Y1Q8NGV0 311 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR8K5Q8NH50 307 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FLVCR1-AS1Q8TAF5 88 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CCDC110Q8TBZ0 833 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LKAAEAR1Q8TD35 194 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BRSK1Q8TDC3 778 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C8orf44Q96CB5 159 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DCUN1D1Q96GG9 259 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MAGEB10Q96LZ2 347 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FCRL4Q96PJ5 515 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CHP1Q99653 195 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WDR77Q9BQA1 342 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 XPO4Q9C0E2 1151 aaKnown RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TRABDQ9H4I3 376 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C1GALT1Q9NS00 363 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IMPACTQ9P2X3 320 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NDOR1Q9UHB4 597 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPN3Q9UHW5 284 aaPredicted RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDC23Q9UJX2 597 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 COPG1Q9Y678 874 aaKnown RBP5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPG11Q96JI7 2443 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AKAP6Q13023 2319 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C2orf74A8MZ97 194 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNF487B1APH4 448 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GOLGA6L22H0YM25 854 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 H7C0C1 242 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IFRD1O00458 451 aaPredicted RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PEX12O00623 359 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MFAP3LO75121 409 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CHRM5P08912 532 aaPredicted RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TPH1P17752 444 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGXTP21549 392 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PSMB5P28074 263 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NDUFS1P28331 727 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ADRA1AP35348 466 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANP32AP39687 249 aaKnown RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GRIA3P42263 894 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ATP5OP48047 213 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PMP22Q01453 160 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OTUD4Q01804 1114 aaKnown RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 Q0VFX4 171 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CDC16Q13042 620 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MPP3Q13368 585 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 POU6F1Q14863 301 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TAF1AQ15573 450 aaPredicted RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TAZQ16635 292 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DBN1Q16643 649 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SYTL3Q4VX76 610 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCDC38Q502W7 563 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 UNC5AQ6ZN44 842 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 Q6ZS92 163 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TTLL10Q6ZVT0 673 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TAS2R42Q7RTR8 314 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HOOK3Q86VS8 718 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SERPINA9Q86WD7 417 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VRK3Q8IV63 474 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MCEMP1Q8IX19 187 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PARP9Q8IXQ6 854 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CATSPER1Q8NEC5 780 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 P3H4Q92791 437 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PHF12Q96QT6 1004 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR2A14Q96R47 310 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FCRL5Q96RD9 977 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DNAJC7Q99615 494 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 COPS8Q99627 209 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BARD1Q99728 777 aaKnown RBP5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ABHD10Q9NUJ1 306 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TXLNGQ9NUQ3 528 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HACD3Q9P035 362 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACSL5Q9ULC5 683 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ASF1AQ9Y294 204 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HS3ST3B1Q9Y662 390 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MAU2Q9Y6X3 613 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 COLEC10Q9Y6Z7 277 aa5.77□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IGLV3-16A0A075B6K0 115 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms