RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CYP3A7P24462 503 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ITGB8P26012 769 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ADORA2AP29274 412 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRDX6P30041 224 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 KIR2DL3P43628 341 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ALDH7A1P49419 539 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 BLKP51451 505 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CNN1P51911 297 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 MYL6P60660 151 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SIRPAP78324 504 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PIGFQ07326 219 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HSPB3Q12988 150 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF177Q13360 481 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 XRCC4Q13426 336 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RIN1Q13671 783 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 E2F2Q14209 437 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RTP5Q14D33 572 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RPE65Q16518 533 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CARTPTQ16568 116 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM83EQ2M2I3 478 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLHL40Q2TBA0 621 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 NKAIN1Q4KMZ8 207 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 AASDHQ4L235 1098 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SPANXN2Q5MJ10 180 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRIF1Q5T3J3 769 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RGS7BPQ6MZT1 257 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 KIAA1161Q6NSJ0 714 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 DLEU7Q6UYE1 221 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF600Q6ZNG1 722 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM26Q6ZUK4 368 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RHOUQ7L0Q8 258 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 DOK3Q7L591 496 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HIST3H2AQ7L7L0 130 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RNF144BQ7Z419 303 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 GPR180Q86V85 440 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 GRAMD2AQ8IUY3 354 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF595Q8IYB9 648 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CRYBG2Q8N1P7 616 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 FITM2Q8N6M3 262 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF565Q8N9K5 539 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CCDC63Q8NA47 563 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 Q8NA96 180 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM71CQ8NEG0 241 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 C7orf57Q8NEG2 295 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF397Q8NF99 534 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR5M3Q8NGP4 307 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC35B2Q8TB61 432 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 C2CD4CQ8TF44 421 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CCDC12Q8WUD4 166 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PDCD6IPQ8WUM4 868 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ASZ1Q8WWH4 475 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LIPHQ8WWY8 451 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PIBF1Q8WXW3 757 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ST8SIA2Q92186 375 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LARP4BQ92615 738 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RAD54LQ92698 747 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 GFM2Q969S9 779 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC41A3Q96GZ6 507 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 C12orf66Q96MD2 445 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRFN5Q96NI6 719 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRRC3BQ96PB8 259 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 BTBD9Q96Q07 612 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SEPT5Q99719 369 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SPZ1Q9BXG8 430 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC26A1Q9H2B4 701 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM245Q9H330 911 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PLEKHA4Q9H4M7 779 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 FN3KRPQ9HA64 309 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CYP3A43Q9HB55 503 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LY9Q9HBG7 655 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 DLL4Q9NR61 685 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CHRAC1Q9NRG0 131 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SDHAF3Q9NRP4 125 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC22A11Q9NSA0 550 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM207AQ9NSI2 230 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PKD2L2Q9NZM6 624 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CNOT2Q9NZN8 540 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 LARSQ9P2J5 1176 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANKFY1Q9P2R3 1169 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 STX18Q9P2W9 335 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 NKX1-2Q9UD57 310 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 DBNLQ9UJU6 430 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CROTQ9UKG9 612 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PLCL2Q9UPR0 1127 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM184BQ9Y519 407 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SBNO1A3KN83 1393 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 NCANO14594 1321 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 UTYO14607 1347 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ARHGEF35A5YM69 484 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANKRD61A6NGH8 418 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 GRXCR1A8MXD5 290 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 B8ZZF3 427 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PSMD11O00231 422 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 CLDN4O14493 209 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 ARHGEF9O43307 516 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 PPIP5K2O43314 1243 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 TSPAN1O60635 241 aa4.31□□□□□ -1.72
HMGB3P21-201ENST00000452483 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms