RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LOC105371267A0A1B0GV96 52 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PRSS51A0A1B0GVH4 220 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 A0A1W2PPM1 405 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LNP1A1A4G5 178 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MROH6A6NGR9 719 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 E9PI62 339 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DFFAO00273 331 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLSCR1O15162 318 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MAGEB4O15481 346 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 SNNO75324 88 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 MT-ND1P03886 318 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TPOP07202 933 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SRPRAP08240 638 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 H2AFB2P0C5Z0 115 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GKN3PP0CG01 181 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DARSP14868 501 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 HTR1EP28566 365 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MMP12P39900 470 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PSMD8P48556 350 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SULT1E1P49888 294 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EFNA5P52803 228 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNAJB13P59910 316 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RAB10P61026 200 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GLO1Q04760 184 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GRIK2Q13002 908 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LAPTM5Q13571 262 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF234Q14588 700 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CHRNA6Q15825 494 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 STXBP2Q15833 593 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NTRK3Q16288 839 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NDUFA9Q16795 377 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EXOC3L2Q2M3D2 409 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CERKLQ49MI3 558 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 EPHA10Q5JZY3 1008 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 UBAP2Q5T6F2 1119 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 KIAA1614Q5VZ46 1190 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CD276Q5ZPR3 534 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GLYATQ6IB77 296 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KIAA1161Q6NSJ0 714 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LETMD1Q6P1Q0 360 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PADI6Q6TGC4 694 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 KCNT2Q6UVM3 1135 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MTSS1LQ765P7 747 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF227Q86WZ6 799 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SPPL2CQ8IUH8 684 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LYSMD2Q8IV50 215 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DCUN1D3Q8IWE4 304 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PLD6Q8N2A8 252 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PGBD3Q8N328 593 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MTURNQ8N3F0 131 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 UXS1Q8NBZ7 420 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C3orf58Q8NDZ4 430 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CHDHQ8NE62 594 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF548Q8NEK5 533 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ADAMTS14Q8WXS8 1223 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TM9SF4Q92544 642 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NSMAFQ92636 917 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FKBP10Q96AY3 582 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C18orf25Q96B23 403 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 LGALS12Q96DT0 336 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CLIP3Q96DZ5 547 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 HEXIM2Q96MH2 286 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 NPAS2Q99743 824 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ADAM2Q99965 735 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MED10Q9BTT4 135 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 WRAP53Q9BUR4 548 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 CNPPD1Q9BV87 410 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 NIF3L1Q9GZT8 377 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SAP130Q9H0E3 1048 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LMAN2LQ9H0V9 348 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 EXO5Q9H790 373 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CATSPERBQ9H7T0 1116 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SPON1Q9HCB6 807 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SDHAF3Q9NRP4 125 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PNO1Q9NRX1 252 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 AGPAT3Q9NRZ7 376 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CHST7Q9NS84 486 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC38A7Q9NVC3 462 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SRRDQ9UH36 339 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNMT3LQ9UJW3 386 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ACSL6Q9UKU0 697 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 HCN2Q9UL51 889 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GINS2Q9Y248 185 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SAMHD1Q9Y3Z3 626 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 SNCAIPQ9Y6H5 919 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 USP31Q70CQ4 1352 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CCDC88AQ3V6T2 1871 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LRP6O75581 1613 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 PQLC2LA1A4F0 135 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ELOVL7A1L3X0 281 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 OR5K3A6NET4 321 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AGAP14A8MT82 685 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 USP17L12C9JPN9 530 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 USP17L21D6R901 530 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FANCGO15287 622 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ZBTB24O43167 697 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 LRRTM2O43300 516 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms