RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DNAJC24Q6P3W2 148 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 DCUN1D2Q6PH85 259 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 SHISA6Q6ZSJ9 500 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 LILRB4Q8NHJ6 448 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 BRIX1Q8TDN6 353 aaKnown RBP12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 ASB5Q8WWX0 329 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 LCN9Q8WX39 176 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 MBD6Q96DN6 1003 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 SPSB2Q99619 263 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 SNRNP25Q9BV90 132 aaKnown RBP12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 FAM60AQ9NP50 221 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 IFNKQ9P0W0 207 aa12.09□□□□□ -0.47
AC004540.1-204ENST00000449537 NKX2-6A6NCS4 301 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 GOLGA6L6A8MZA4 724 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 NPIPA5E9PKD4 350 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 BTN3A3O00478 584 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 PRRG2O14669 202 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ADAM10O14672 748 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 CTAG2O75638 210 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 WFS1O76024 890 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TOXO94900 526 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TSPAN12O95859 305 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TPM1P09493 284 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 PYGMP11217 842 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ITGAXP20702 1163 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 FDXRP22570 491 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 AMPD1P23109 780 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 MSX1P28360 303 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 SPAM1P38567 509 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 OLIG2Q13516 323 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 NR1I3Q14994 352 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TMCO3Q6UWJ1 677 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 SIRT6Q8N6T7 355 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ACVR1CQ8NER5 493 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 VPS35Q96QK1 796 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 STK33Q9BYT3 514 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 UCK2Q9BZX2 261 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 XPO4Q9C0E2 1151 aaKnown RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 RNF32Q9H0A6 362 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 DEF6Q9H4E7 631 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 SOX17Q9H6I2 414 aaPredicted RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ZWILCHQ9H900 591 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 NFKBIL1Q9UBC1 381 aaPredicted RBP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TMPRSS11EQ9UL52 423 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 ACSL5Q9ULC5 683 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 MYO6Q9UM54 1294 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 NPIPA1Q9UND3 350 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.48
AC004540.1-204ENST00000449537 TCRBV5S1A1TA0A578 114 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 C2orf74A8MZ97 194 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 HCRTR1O43613 425 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ONECUT2O95948 504 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 PRR35P0CG20 571 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ACPPP15309 386 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 TFF3Q07654 80 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 SYCP1Q15431 976 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ALG1LQ6GMV1 187 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 CLYBLQ8N0X4 340 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 RASGEF1AQ8N9B8 481 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 C19orf47Q8N9M1 422 aaKnown RBP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ARRDC2Q8TBH0 407 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 TSPAN10Q9H1Z9 355 aaPredicted RBP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 SLC26A1Q9H2B4 701 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ZNF395Q9H8N7 513 aaPredicted RBP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 ETNK2Q9NVF9 386 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 HAUS2Q9NVX0 235 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
AC004540.1-204ENST00000449537 FAM237BA0A1B0GVD1 139 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 OR5H15A6NDH6 313 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 H3BRJ5 948 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 BTN3A1O00481 513 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 MAP2K7O14733 419 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 TTI1O43156 1089 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 ASNA1O43681 348 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 GFPT2O94808 682 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 BMP10O95393 424 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 SERPINA7P05543 415 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 CTSBP07858 339 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 SLC35G4P0C7Q5 338 aa12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 PBLDP30039 288 aaPredicted RBP12.06□□□□□ -0.48
AC004540.1-204ENST00000449537 GABRA4P48169 554 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms