RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 SPACA3Q8IXA5 215 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 IFT81Q8WYA0 676 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 CERS2Q96G23 380 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 PDE7BQ9NP56 450 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 IARS2Q9NSE4 1012 aaKnown RBP15.91■□□□□ 0.14
SF3A1-204ENST00000447376 SOHLH2Q9NX45 425 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 IL1RAPL1Q9NZN1 696 aa15.91■□□□□ 0.14
SF3A1-204ENST00000447376 DMGDHQ9UI17 866 aaKnown RBP15.91■□□□□ 0.14
SF3A1-204ENST00000447376 ANKRD11Q6UB99 2663 aaPredicted RBP15.91■□□□□ 0.14
SF3A1-204ENST00000447376 APC2O95996 2303 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 PIPSLA2A3N6 862 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 C9orf172C9J069 976 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 BHMG1C9JSJ3 638 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-204ENST00000447376 KIF1CO43896 1103 aaKnown RBP15.9■□□□□ 0.14
SF3A1-204ENST00000447376 SLCO2B1O94956 709 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ZBTB11O95625 1053 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-204ENST00000447376 S1PR4O95977 384 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 GSTA2P09210 222 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ERVK-10P10266 1014 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 NELFEP18615 380 aaKnown RBP15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ACADLP28330 430 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 CCNFP41002 786 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 SLC1A2P43004 574 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 HSD11B2P80365 405 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ACY1Q03154 408 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ABRQ12979 859 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 CTBP1Q13363 440 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 IL11RAQ14626 422 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 TRADDQ15628 312 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 CTSL3PQ5NE16 218 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 ANKS6Q68DC2 871 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 UGT3A1Q6NUS8 523 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 KIAA0408Q6ZU52 694 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 RASGRP3Q8IV61 690 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 DCUN1D3Q8IWE4 304 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 LKAAEAR1Q8TD35 194 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 KLHL6Q8WZ60 621 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 BIRC8Q96P09 236 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 MAP3K3Q99759 626 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 RAB11FIP5Q9BXF6 653 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 FANCEQ9HB96 536 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 FBXO6Q9NRD1 293 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-204ENST00000447376 OR6C2Q9NZP2 312 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 FOXJ2Q9P0K8 574 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 FBXO5Q9UKT4 447 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 SLC39A10Q9ULF5 831 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 B3GALT1Q9Y5Z6 326 aa15.9■□□□□ 0.14
SF3A1-204ENST00000447376 URB1O60287 2271 aaKnown RBP15.89■□□□□ 0.13
SF3A1-204ENST00000447376 NIPSNAP2O75323 286 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 VPS26AO75436 327 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 ATP5DP30049 168 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 MAGEA4P43358 317 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 TLE3Q04726 772 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 MGAT5Q09328 741 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 FASTKD3Q14CZ7 662 aaKnown RBP15.89■□□□□ 0.13
SF3A1-204ENST00000447376 MANEAQ5SRI9 462 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 BPHLQ86WA6 291 aaPredicted RBP15.89■□□□□ 0.13
SF3A1-204ENST00000447376 PPP1R3BQ86XI6 285 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 DENND6AQ8IWF6 608 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 ZBTB2Q8N680 514 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 IL22RA1Q8N6P7 574 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 BMPERQ8N8U9 685 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 OR6C1Q96RD1 312 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 CTRCQ99895 268 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 C1GALT1Q9NS00 363 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 ZDHHC18Q9NUE0 388 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 NSMCE4AQ9NXX6 385 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 ZFATQ9P243 1243 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 POMT2Q9UKY4 750 aa15.89■□□□□ 0.13
SF3A1-204ENST00000447376 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 BTN3A1O00481 513 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 SPAG6O75602 509 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 ITPKBP27987 946 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 CARSP49589 748 aaKnown RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 RAB28P51157 221 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 KPNA2P52292 529 aaKnown RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 ILF2Q12905 390 aaKnown RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 TUBB3Q13509 450 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 COL28A1Q2UY09 1125 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 CCDC81Q6ZN84 652 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 ZFAND4Q86XD8 727 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 CNTN4Q8IWV2 1026 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 UNC5BQ8IZJ1 945 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 ZSCAN1Q8NBB4 408 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 C2CD4AQ8NCU7 369 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 CDKL2Q92772 493 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 N4BP2L2Q92802 583 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 KCNJ9Q92806 393 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 KIAA1143Q96AT1 154 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 RAD51AP1Q96B01 352 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 SLC22A18Q96BI1 424 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 FAM136AQ96C01 138 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 SLC41A2Q96JW4 573 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 CCNL2Q96S94 520 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-204ENST00000447376 FMO2Q99518 471 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
SF3A1-204ENST00000447376 XKR8Q9H6D3 395 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms