RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ESRP1Q6NXG1 681 aaKnown RBP7.74□□□□□ -1.17
SMG1-202ENST00000446231 RAB42Q8N4Z0 105 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 CENPOQ9BU64 300 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 FXYD6Q9H0Q3 95 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 IGKV6D-41A0A0C4DH26 115 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 DDTLA6NHG4 134 aaPredicted RBP7.74□□□□□ -1.17
SMG1-202ENST00000446231 HNRNPA0Q13151 305 aaKnown RBP7.74□□□□□ -1.17
SMG1-202ENST00000446231 MOB2Q70IA6 237 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 TMEM181Q9P2C4 612 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 INPPL1O15357 1258 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 ALX3O95076 343 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 GMPRP36959 345 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 LHX1P48742 406 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 GPR15P49685 360 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 GALNT3Q14435 633 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 OLFML2AQ68BL7 652 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 PRSS48Q7RTY5 328 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 TNFAIP8L1Q8WVP5 186 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 SEMA3CQ99985 751 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 TFB2MQ9H5Q4 396 aaKnown RBP7.74□□□□□ -1.17
SMG1-202ENST00000446231 TMLHEQ9NVH6 421 aa7.74□□□□□ -1.17
SMG1-202ENST00000446231 TYMPP19971 482 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 USF2Q15853 346 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 TMEM102Q8N9M5 508 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 OR51J1Q9H342 316 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ATP13A3Q9H7F0 1226 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PPIEQ9UNP9 301 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 M0R036 132 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 MMP10P09238 476 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PRMT2P55345 433 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 SRSF11Q05519 484 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 BTN1A1Q13410 526 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 STYXQ8WUJ0 223 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 SLC6A4P31645 630 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 DAW1Q8N136 415 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 MYRFLQ96LU7 910 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.174e-7■■■■■ 28.7
SMG1-202ENST00000446231 NEMP2A6NFY4 417 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 NRP1O14786 923 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 IFNW1P05000 195 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ADRA2BP18089 450 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 LDB1Q86U70 411 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 PAPD5Q8NDF8 572 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 THG1LQ9NWX6 298 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 C1orf109Q9NX04 203 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ACSL5Q9ULC5 683 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ZNF7P17097 686 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 HEPACAMQ14CZ8 416 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 BEND5Q7L4P6 421 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CIR1Q86X95 450 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 SYT12Q8IV01 421 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 RHOXF1Q8NHV9 184 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 RFT1Q96AA3 541 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 NANOGQ9H9S0 305 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 DTLQ9NZJ0 730 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 EPORP19235 508 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CRHBPP24387 322 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 GRSF1Q12849 480 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG1-202ENST00000446231 CLCA4Q14CN2 919 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PLA2G4EQ3MJ16 856 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 SETMARQ53H47 684 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 DCBLD1Q8N8Z6 715 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FRS2Q8WU20 508 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 BEX1Q9HBH7 125 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 NOX1Q9Y5S8 564 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ISM1B1AKI9 464 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CBX4O00257 560 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FBXO47Q5MNV8 452 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 QRFPRQ96P65 431 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PCDHGB5Q9Y5G0 923 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ANKDD1BA6NHY2 528 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 REM1O75628 298 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 VNN1O95497 513 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 S100A2P29034 98 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ARF5P84085 180 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 GPR19Q15760 415 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 STEAP3Q658P3 488 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 METTL7BQ6UX53 244 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 OXR1Q8N573 874 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FAM151AQ8WW52 585 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 GPR22Q99680 433 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 B3GNT5Q9BYG0 378 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ABI2Q9NYB9 513 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 MSI1O43347 362 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 MITFO75030 526 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 OR5F1O95221 314 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ANXA8P13928 327 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CYP2A7P20853 494 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 BTG3Q14201 252 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 FAM76BQ5HYJ3 339 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 NOL9Q5SY16 702 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 ZNF613Q6PF04 617 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CYS1Q717R9 158 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 RNF130Q86XS8 419 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FLAD1Q8NFF5 587 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 RPRD1AQ96P16 312 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 FAUP35544 74 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 OR8J3Q8NGG0 315 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 PEBP4Q96S96 227 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms