RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HSMCR30P0CW71 290 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 SLC2A4P14672 509 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CTSKP43235 329 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 HUNKP57058 714 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 MAPKAPK3Q16644 382 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 TBRG1Q3YBR2 411 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 SPANXN4Q5MJ08 99 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 RAP1GAP2Q684P5 730 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 ZDHHC21Q8IVQ6 265 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 SLC38A6Q8IZM9 456 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 KRTCAP2Q8N6L1 136 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 AMER2Q8N7J2 671 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 DNASE1L2Q92874 299 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 PGAP3Q96FM1 320 aaPredicted RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 ST6GAL2Q96JF0 529 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CENPOQ9BU64 300 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 MSH3P20585 1137 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CRISP3P54108 245 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 GNG2P59768 71 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CHRNEQ04844 493 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 KCTD2Q14681 263 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 TIGD6Q17RP2 521 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 Q5BKY6 102 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 SIGIRRQ6IA17 410 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CAPN13Q6MZZ7 669 aaPredicted RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 ALKAL1Q6UXT8 129 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 OR8J3Q8NGG0 315 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 NUSAP1Q9BXS6 441 aaKnown RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 SLC25A51Q9H1U9 297 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 SARS2Q9NP81 518 aaKnown RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 DCAF13Q9NV06 445 aaKnown RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 KIF17Q9P2E2 1029 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 VPS4AQ9UN37 437 aa13.68□□□□□ -0.22
VPS52-212ENST00000445902 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
VPS52-212ENST00000445902 ERVH48-1M5A8F1 160 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 CTDSP2O14595 271 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 VIPP01282 170 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ABCB1P08183 1280 aaPredicted RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 BMP1P13497 986 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 AZGP1P25311 298 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 HK3P52790 923 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 NUDT6P53370 316 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ZNF45Q02386 682 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 FADDQ13158 208 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 LRRC26Q2I0M4 334 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 RFX4Q33E94 735 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 SETMARQ53H47 684 aaPredicted RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 SPANXN2Q5MJ10 180 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 WDR45BQ5MNZ6 344 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 TUBA3EQ6PEY2 450 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 UBQLNLQ8IYU4 475 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 OR56A4Q8NGH8 313 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 GTF2H4Q92759 462 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 IMP4Q96G21 291 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 SNX18Q96RF0 628 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 RUBCNLQ9H714 662 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 AGO3Q9H9G7 860 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 GBF1Q92538 1859 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 FFAR3O14843 346 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 GPR42O15529 346 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 MMP2P08253 660 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 PPP3CCP48454 512 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ARPP19P56211 112 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 RAD51Q06609 339 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ABRAXAS2Q15018 415 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 SGO1Q5FBB7 561 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 TP53I13Q8NBR0 393 aaPredicted RBP13.67□□□□□ -0.22
VPS52-212ENST00000445902 SCAMP5Q8TAC9 235 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 COPS4Q9BT78 406 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 CATSPERZQ9NTU4 200 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 TAS2R9Q9NYW1 312 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 KCNH4Q9UQ05 1017 aa13.67□□□□□ -0.22
VPS52-212ENST00000445902 LOC110117498-PIK3R3F6TDL0 507 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 ANKRD28O15084 1053 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 TLL1O43897 1013 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 KRT6CP48668 564 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 PGFP49763 221 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 CDKN1CP49918 316 aaPredicted RBP13.66□□□□□ -0.22
VPS52-212ENST00000445902 TUBA1BP68363 451 aa13.66□□□□□ -0.22
VPS52-212ENST00000445902 ZNF33AQ06730 810 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms