RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 GDPD4Q6W3E5 623 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 CEP57L1Q8IYX8 460 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 POMGNT2Q8NAT1 580 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 MOSPD2Q8NHP6 518 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ST6GAL2Q96JF0 529 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 MMP28Q9H239 520 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 APOBEC3GQ9HC16 384 aaKnown RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 PTTG2Q9NZH5 202 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 TAAR2Q9P1P5 351 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 WDR35Q9P2L0 1181 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 FAF1Q9UNN5 650 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 SPIN1Q9Y657 262 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 MADDQ8WXG6 1647 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 EIF3AQ14152 1382 aaKnown RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ZNF518AQ6AHZ1 1483 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ANKUB1A6NFN9 424 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 LMX1BO60663 402 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 ATP1A1P05023 1023 aaKnown RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 CCR3P51677 355 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 DVL1P1P54792 670 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 MFAP5Q13361 173 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 ALCAMQ13740 583 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 SNTB1Q13884 538 aaKnown RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 TMEM266Q2M3C6 531 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 SLC30A6Q6NXT4 461 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 C19orf48Q6RUI8 117 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 LINGO4Q6UY18 593 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 MARK2Q7KZI7 788 aaKnown RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 TMEM173Q86WV6 379 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 AFAP1Q8N556 730 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 CPSF7Q8N684 471 aaKnown RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 TC2NQ8N9U0 490 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 KLHDC9Q8NEP7 349 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 OR5M8Q8NGP6 311 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 OLIG1Q8TAK6 271 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 PGAP3Q96FM1 320 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 LINC00615Q96LM1 132 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 INPP4AQ96PE3 977 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 NODALQ96S42 347 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 EQTNQ9NQ60 294 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 SLC38A7Q9NVC3 462 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 PRMT7Q9NVM4 692 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 C5AR2Q9P296 337 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 VWDEQ8N2E2 1590 aa4.22□□□□□ -1.73
HMGB3P6-201ENST00000444896 PTPRTO14522 1441 aa4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 SMG6Q86US8 1419 aaKnown RBP4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 SCAPERQ9BY12 1400 aa4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 EFCAB6Q5THR3 1501 aa4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 ZMYM4Q5VZL5 1548 aa4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 CLTCL1P53675 1640 aa4.21□□□□□ -1.73
HMGB3P6-201ENST00000444896 SMCHD1A6NHR9 2005 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 A0A0B4J293 547 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 A0A1W2PPM1 405 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZNF432O94892 652 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 H1F0P07305 194 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 DANCRP0C864 163 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 PAX1P15863 534 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 PFKFB1P16118 471 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 UBXN2AP68543 259 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 CALD1Q05682 793 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 RASA2Q15283 850 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 KYNUQ16719 465 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 CRY2Q49AN0 593 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 C9orf152Q5JTZ5 239 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 CAMKMTQ7Z624 323 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 GPALPP1Q8IXQ4 340 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TDRD5Q8NAT2 981 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TSPAN14Q8NG11 270 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 EXD1Q8NHP7 514 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZNF473Q8WTR7 871 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TEKT4Q8WW24 435 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 MTERF3Q96E29 417 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 BTBD10Q9BSF8 475 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 FNDC11Q9BVV2 318 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 VN1R1Q9GZP7 353 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TFB2MQ9H5Q4 396 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TBC1D17Q9HA65 648 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZBTB20Q9HC78 741 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TCF7L2Q9NQB0 619 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TAB2Q9NYJ8 693 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 TUBE1Q9UJT0 475 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 NUDCQ9Y266 331 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 SCAF11Q99590 1463 aaKnown RBP4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 SYNMO15061 1565 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 IQGAP1P46940 1657 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 KIF1BO60333 1816 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 LMTK2Q8IWU2 1503 aa4.21□□□□□ -1.74
HMGB3P6-201ENST00000444896 HECW2Q9P2P5 1572 aa4.2□□□□□ -1.74
HMGB3P6-201ENST00000444896 MYOM2P54296 1465 aa4.2□□□□□ -1.74
HMGB3P6-201ENST00000444896 INSRP06213 1382 aa4.2□□□□□ -1.74
HMGB3P6-201ENST00000444896 PARD3Q8TEW0 1356 aa4.2□□□□□ -1.74
HMGB3P6-201ENST00000444896 FAM172BPA6NC97 362 aa4.2□□□□□ -1.74
HMGB3P6-201ENST00000444896 PRR32B1ATL7 298 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms