RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 HOXB3P14651 431 aaPredicted RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 CDH3P22223 829 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 PDX1P52945 283 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 MAPK10P53779 464 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 ABRQ12979 859 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 NAB1Q13506 487 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 CUL1Q13616 776 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 HP1BP3Q5SSJ5 553 aaPredicted RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 FAM45BPQ6NSW5 357 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 DUS1LQ6P1R4 473 aaKnown RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 ARHGAP22Q7Z5H3 698 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 PROSER1Q86XN7 944 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 IFT20Q8IY31 132 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 SIDT2Q8NBJ9 832 aaKnown RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 FAM45AQ8TCE6 357 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 TSPAN17Q96FV3 270 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 AARSD1Q9BTE6 412 aaKnown RBP11.91□□□□□ -0.5
LTBR-204ENST00000444814 SLC39A1Q9NY26 324 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 GRHL1Q9NZI5 618 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 DHRS7Q9Y394 339 aa11.91□□□□□ -0.5
LTBR-204ENST00000444814 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
LTBR-204ENST00000444814 PIPSLA2A3N6 862 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 EFCAB7A8K855 629 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 ZBTB14O43829 449 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 BANF1O75531 89 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 ZBTB11O95625 1053 aaPredicted RBP11.9□□□□□ -0.5
LTBR-204ENST00000444814 CD9P21926 228 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 ATP1A2P50993 1020 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 RAB28P51157 221 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 UCNP55089 124 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 MPP1Q00013 466 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 PRKG2Q13237 762 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 IL11RAQ14626 422 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 KIR2DS3Q14952 304 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 TEDDM1Q5T9Z0 273 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 ZNF574Q6ZN55 896 aaPredicted RBP11.9□□□□□ -0.5
LTBR-204ENST00000444814 C3orf62Q6ZUJ4 267 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 CLEC14AQ86T13 490 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 MARCH9Q86YJ5 346 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 MYO1HQ8N1T3 1032 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 AGGF1Q8N302 714 aaeCLIP11.9□□□□□ -0.5
LTBR-204ENST00000444814 RCBTB1Q8NDN9 531 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 OR5AR1Q8NGP9 310 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 MDM1Q8TC05 714 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 FBXO25Q8TCJ0 367 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 RSC1A1Q92681 617 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 TRIM56Q9BRZ2 755 aaKnown RBP11.9□□□□□ -0.5
LTBR-204ENST00000444814 TRIM54Q9BYV2 358 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 FBXO8Q9NRD0 319 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 C1GALT1Q9NS00 363 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 IL1RAPL1Q9NZN1 696 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 PCDHGA3Q9Y5H0 932 aa11.9□□□□□ -0.5
LTBR-204ENST00000444814 ARHGEF17Q96PE2 2063 aaPredicted RBP11.9□□□□□ -0.5
LTBR-204ENST00000444814 PTPRBP23467 1997 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 POLR1CO15160 346 aaPredicted RBP11.89□□□□□ -0.51
LTBR-204ENST00000444814 HAUS5O94927 633 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 POLR2CP19387 275 aaPredicted RBP11.89□□□□□ -0.51
LTBR-204ENST00000444814 CYP2A7P20853 494 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 MPSTP25325 297 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 MAGEA4P43358 317 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 HSD11B2P80365 405 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 MRPS25P82663 173 aaKnown RBP11.89□□□□□ -0.51
LTBR-204ENST00000444814 SLC7A5Q01650 507 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 MC2RQ01718 297 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 C16orf72Q14CZ0 275 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 FAM92BQ6ZTR7 304 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 KCNE4Q8WWG9 221 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 SEC14L1Q92503 715 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 N4BP2L2Q92802 583 aaPredicted RBP11.89□□□□□ -0.51
LTBR-204ENST00000444814 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 FMO2Q99518 471 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 CPNE1Q99829 537 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 SOHLH2Q9NX45 425 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 UTP6Q9NYH9 597 aaKnown RBP11.89□□□□□ -0.51
LTBR-204ENST00000444814 MOCS1Q9NZB8 636 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 OGFRQ9NZT2 677 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 POMT2Q9UKY4 750 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 VWA7Q9Y334 891 aa11.89□□□□□ -0.51
LTBR-204ENST00000444814 CDRT15L2A8MXV6 281 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 RASGRF2O14827 1237 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 C8GP07360 202 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 HIST1H2AGP0C0S8 130 aaPredicted RBP11.88□□□□□ -0.51
LTBR-204ENST00000444814 HIST1H2ADP20671 130 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 CLCN7P51798 805 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 GFERP55789 205 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 IL2P60568 153 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 CFHR1Q03591 330 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 FOXM1Q08050 763 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 SP140Q13342 867 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 ARHGAP19Q14CB8 494 aa11.88□□□□□ -0.51
LTBR-204ENST00000444814 KYNUQ16719 465 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms