RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MAPKAPK3Q16644 382 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 TSTQ16762 297 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 TRIM71Q2Q1W2 868 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 PAGE3Q5JUK9 113 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 OR10Q1Q8NGQ4 319 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 FARSBQ9NSD9 589 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 DCAF13Q9NV06 445 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 TNPO3Q9Y5L0 923 aaKnown RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 PROM1O43490 865 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 DNTTP04053 509 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 BICRALQ6AI39 1079 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 CHAC2Q8WUX2 184 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 RERGLQ9H628 205 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 RANBP3Q9H6Z4 567 aaPredicted RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 GPBP1L1Q9HC44 474 aaPredicted RBP4.93□□□□□ -1.62
HERC1-201ENST00000443617 CAMTA1Q9Y6Y1 1673 aa4.93□□□□□ -1.62
HERC1-201ENST00000443617 IFNA14P01570 189 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 RUNDC3AQ59EK9 446 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 EEF1DP3Q658K8 133 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ARHGAP17Q68EM7 881 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SPATA22Q8NHS9 363 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 KCNC2Q96PR1 638 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 KCNA7Q96RP8 456 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ACOT13Q9NPJ3 140 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ALPPP05187 535 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 RGS6P49758 472 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ITGA1P56199 1179 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 INTS6LQ5JSJ4 861 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 HSH2DQ96JZ2 352 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ASB7Q9H672 318 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TMPRSS11EQ9UL52 423 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NT5C1B-RDH14C9J2C7 533 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ANKRD28O15084 1053 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CD68P34810 354 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 KCNQ1P51787 676 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 FAPQ12884 760 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TATDN3Q17R31 274 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PARP15Q460N3 678 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CCDC149Q6ZUS6 474 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 UNC93AQ86WB7 457 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CILP2Q8IUL8 1156 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 KRTCAP2Q8N6L1 136 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZNF675Q8TD23 568 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CMAHPQ9Y471 501 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 A0A1B0GW55 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PPP6CO00743 305 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 C9P02748 559 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L2P0CJ85 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L3P0CJ86 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L4P0CJ87 422 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L5P0CJ88 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L6P0CJ89 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4L7P0CJ90 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TNFSF8P32971 234 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DSC3Q14574 896 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 VANGL1Q8TAA9 524 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUX4Q9UBX2 424 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PKD1L3Q7Z443 1732 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 LEUTXA8MZ59 168 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 VPS26AO75436 327 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ADORA3P0DMS8 318 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 JUNDP17535 347 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 HTR3AP46098 478 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 INCA1Q0VD86 236 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PIM3Q86V86 326 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 KIAA1191Q96A73 305 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 DUSP16Q9BY84 665 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GPR83Q9NYM4 423 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SEC14L4Q9UDX3 406 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ENOPH1Q9UHY7 261 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ADAM30Q9UKF2 790 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 BTN3A1O00481 513 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TXNP10599 105 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 MILR1Q7Z6M3 343 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZFAND4Q86XD8 727 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 VWA5B2Q8N398 1253 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PTERQ96BW5 349 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NECTIN4Q96NY8 510 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CCSER2Q9H7U1 834 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NT5MQ9NPB1 228 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PDGFCQ9NRA1 345 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PRMT7Q9NVM4 692 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 UBA6A0AVT1 1052 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 SIX3O95343 332 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 SCNN1AP37088 669 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GSTM5P46439 218 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GPLD1P80108 840 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 RIPPLY1Q0D2K3 151 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TP53BP2Q13625 1128 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 VEPH1Q14D04 833 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZNF678Q5SXM1 525 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TSTD2Q5T7W7 516 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 RBM23Q86U06 439 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 TESCQ96BS2 214 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 REXO5Q96IC2 774 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 C12orf42Q96LP6 360 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 TBATAQ96M53 351 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GFM1Q96RP9 751 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms