RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ERV3-1Q14264 604 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GRB7Q14451 532 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PRPSAP1Q14558 356 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF273Q14593 569 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SMCO1Q147U7 214 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TIGD6Q17RP2 521 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GFOD2Q3B7J2 385 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZACNQ401N2 412 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF404Q494X3 552 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ANKRD39Q53RE8 183 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C9orf152Q5JTZ5 239 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FAM102BQ5T8I3 360 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PIK3R6Q5UE93 754 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GDF6Q6KF10 455 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SCYL2Q6P3W7 929 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PKN3Q6P5Z2 889 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DRICH1Q6PGQ1 229 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ANKS3Q6ZW76 656 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CHSY1Q86X52 802 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TMC8Q8IU68 726 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RHPN2Q8IUC4 686 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 YAF2Q8IY57 180 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ADGRF2Q8IZF7 708 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LILRA2Q8N149 483 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PDIK1LQ8N165 341 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 UBE2J2Q8N2K1 259 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 STX19Q8N4C7 294 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CAMKK1Q8N5S9 505 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF555Q8NEP9 628 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OR7G3Q8NG95 312 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OR13F1Q8NGS4 319 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OR2T34Q8NGX1 318 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DTD1Q8TEA8 209 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RCN3Q96D15 328 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LRIG1Q96JA1 1093 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZC3H10Q96K80 434 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 MRGPRX2Q96LB1 330 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GFM1Q96RP9 751 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 NELL2Q99435 816 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ADAM2Q99965 735 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RTKNQ9BST9 563 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CRB3Q9BUF7 120 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PAPOLGQ9BWT3 736 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 TEKT3Q9BXF9 490 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FAM83DQ9H4H8 585 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MROH8Q9H579 483 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C14orf119Q9NWQ9 140 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 VSX1Q9NZR4 365 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ABCD2Q9UBJ2 740 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4Q9UBX2 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MIOXQ9UGB7 285 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 UBQLN2Q9UHD9 624 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MTCH2Q9Y6C9 303 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NOTCH1P46531 2555 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SDK2Q58EX2 2172 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DNAH14Q0VDD8 3507 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LOC100506127A0A0U1RQW1 187 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A1B0GTQ1 180 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C17orf102A2RUQ5 167 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ASB14A6NK59 587 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ARHGEF33A8MVX0 844 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 K7ENM7 598 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TERTO14746 1132 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SCAMP2O15127 329 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 KHDRBS3O75525 346 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SNAPINO95295 136 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 VNN1O95497 513 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RAB3DO95716 219 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CYP17A1P05093 508 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ARP10275 920 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 UCHL3P15374 230 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF26P17031 533 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 POU3F3P20264 500 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PVALBP20472 110 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 MYL9P24844 172 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SSTR1P30872 391 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ACSL1P33121 698 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CPOXP36551 454 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CPT1AP50416 773 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ARSEP51690 589 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CLCN3P51790 818 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RAB25P57735 213 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 KCNJ10P78508 379 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NTHL1P78549 312 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ATP2C1P98194 919 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ILF3Q12906 894 aaKnown RBP eCLIP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF284Q2VY69 593 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CYP27C1Q4G0S4 372 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CRTC2Q53ET0 693 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PITRM1Q5JRX3 1037 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GLRA4Q5JXX5 417 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PDSS1Q5T2R2 415 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZBTB37Q5TC79 503 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HAGHLQ6PII5 290 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 C16orf59Q7L2K0 433 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PRICKLE2Q7Z3G6 844 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PIWIL4Q7Z3Z4 852 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 POLNQ7Z5Q5 900 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TMEM192Q8IY95 271 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms