RNA–Protein interactions for RNA: ENST00000441973.1

UBE2D3P4-201, Transcript of ubiquitin conjugating enzyme E2 D3 pseudogene 4, humanhuman

BASIC

Gene UBE2D3P4, Length 436 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P4-201ENST00000441973 GTF3AQ92664 365 aaKnown RBP3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SKA1Q96BD8 255 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 C18orf12Q96KH6 178 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 POLR3GLQ9BT43 218 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SPATC1LQ9H0A9 340 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CPVLQ9H3G5 476 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RPS10P5Q9NQ39 176 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 FGF21Q9NSA1 209 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TAB2Q9NYJ8 693 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RHCGQ9UBD6 479 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 GRIP1Q9Y3R0 1128 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RIPK3Q9Y572 518 aa3.52□□□□□ -1.85
UBE2D3P4-201ENST00000441973 MED24O75448 989 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CAPN3P20807 821 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 UGT1A4P22310 534 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ACSL1P33121 698 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HNF4AP41235 474 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 NKX2-1P43699 371 aaPredicted RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CDK3Q00526 305 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HLA-BQ31612 363 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 FIP1L1Q6UN15 594 aaKnown RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 LDB1Q86U70 411 aaPredicted RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RAB42Q8N4Z0 105 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TTC39CQ8N584 583 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TRIML1Q8N9V2 468 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 OR4C3Q8NH37 302 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PHLDA1Q8WV24 401 aaPredicted RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 IRGQQ8WZA9 623 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ARHGAP45Q92619 1136 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 LMF2Q9BU23 707 aaKnown RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ATP13A3Q9H7F0 1226 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 A4GALTQ9NPC4 353 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HACL1Q9UJ83 578 aa3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 LAS1LQ9Y4W2 734 aaKnown RBP3.51□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 LNP1A1A4G5 178 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PTGES3LE9PB15 166 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TSPAN1O60635 241 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PRAMEF11O60813 436 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ZBED4O75132 1171 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 NXPH2O95156 264 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CSRP3P50461 194 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PDX1P52945 283 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PNLIPRP2P54317 469 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 MFAP4P55083 255 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 MAZP56270 477 aaKnown RBP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ELAVL2Q12926 359 aaKnown RBP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RAB41Q5JT25 222 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 BSPRYQ5W0U4 402 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 DHRS7BQ6IAN0 325 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PRSS33Q8NF86 280 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 OR10G8Q8NGN5 311 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 OR13J1Q8NGT2 312 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SAT2Q96F10 170 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TREX2Q9BQ50 279 aaPredicted RBP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 FTOQ9C0B1 505 aaKnown RBP eCLIP3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 WWTR1Q9GZV5 400 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 OSGEPL1Q9H4B0 414 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ARHGEF38Q9NXL2 777 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SPHK1Q9NYA1 384 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PSD3Q9NYI0 1048 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 MTUS1Q9ULD2 1270 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 WDR37Q9Y2I8 494 aa3.5□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HYKKA2RU49 373 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 XRCC3O43542 346 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CREG1O75629 220 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 WDPCPO95876 746 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 VTNP04004 478 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 IGHV4-31P0DP07 118 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 VPREB1P12018 145 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 GARSP41250 739 aaKnown RBP3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CCR10P46092 362 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SLC9A3P48764 834 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 B3GALT5-AS1P59052 145 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 TMF1P82094 1093 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 RIGQ13278 110 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 DRP2Q13474 957 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 IRF3Q14653 427 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ZNF239Q16600 458 aaKnown RBP3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 GLIPR1L2Q4G1C9 344 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PLEKHS1Q5SXH7 462 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 KRT79Q5XKE5 535 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 C4orf50Q6ZRC1 276 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HAUS6Q7Z4H7 955 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 NUDT13Q86X67 352 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 HOGA1Q86XE5 327 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 OR5M8Q8NGP6 311 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SLCO2A1Q92959 643 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 NSMCE3Q96MG7 304 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 USP28Q96RU2 1077 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PIGQQ9BRB3 760 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 MMP27Q9H306 513 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 SUCLA2Q9P2R7 463 aaPredicted RBP3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 KLK13Q9UKR3 277 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 PLAGL1Q9UM63 463 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ZNF148Q9UQR1 794 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 CSAG2Q9Y5P2 127 aa3.49□□□□□ -1.85
UBE2D3P4-201ENST00000441973 ANKRD61A6NGH8 418 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms