RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 REP15Q6BDI9 236 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 AGTRAPQ6RW13 159 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 KIAA1324Q6UXG2 1013 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 CHRDL2Q6WN34 429 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PRR23BQ6ZRT6 265 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PACS2Q86VP3 889 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 HORMAD1Q86X24 394 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SYTL1Q8IYJ3 562 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 DSELQ8IZU8 1212 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 GLB1L3Q8NCI6 653 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 DENND6BQ8NEG7 585 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ST13P5Q8NFI4 369 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 OR2L2Q8NH16 312 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 UTP4Q969X6 686 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 ESAMQ96AP7 390 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 KCNA7Q96RP8 456 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 HOPXQ9BPY8 73 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 LRTM1Q9HBL6 345 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 POLMQ9NP87 494 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 ADA2Q9NZK5 511 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 CCDC167Q9P0B6 97 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ACSL5Q9ULC5 683 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ZNF490Q9ULM2 529 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 MRPS17Q9Y2R5 130 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 KIF26AQ9ULI4 1882 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 LOC730098B7Z3J9 87 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PLK4O00444 970 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 OR7A17O14581 309 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 KIR2DL1P43626 348 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 SLC6A12P48065 614 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PRKG2Q13237 762 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 NAE1Q13564 534 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 KPNB1Q14974 876 aaKnown RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 PON2Q15165 354 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 AP5B1Q2VPB7 878 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 LRIT3Q3SXY7 679 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SGO1Q5FBB7 561 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 FBXO48Q5FWF7 155 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 AGBL4Q5VU57 503 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 DCUN1D3Q8IWE4 304 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 KLHDC8AQ8IYD2 350 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 FBXW8Q8N3Y1 598 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 OR9A1PQ8NGU1 263 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 DLG3Q92796 817 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 RAB11FIP5Q9BXF6 653 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 PCBD2Q9H0N5 130 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 DENND2DQ9H6A0 471 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 SDR39U1Q9NRG7 319 aaPredicted RBP5.88□□□□□ -1.47
VPS50-205ENST00000441602 HEBP1Q9NRV9 189 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SPATA7Q9P0W8 599 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 ATXN10Q9UBB4 475 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 L3MBTL1Q9Y468 752 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 C2orf16Q68DN1 1984 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 SCN8AQ9UQD0 1980 aa5.88□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3DA0A087WVF3 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3IA0A087WXS9 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3EA0A087X179 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3KA0A087X1G2 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 A0A1W2PQU0 124 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3FA6NER0 549 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 CCDC154A6NI56 674 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ARHGEF33A8MVX0 844 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3LB9A6J9 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ARNTLO00327 626 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SPINT1O43278 529 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PI15O43692 258 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 GMNNO75496 209 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PSMG1O95456 288 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3HP0C7X1 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 JUPP14923 745 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DDX5P17844 614 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 CDK3Q00526 305 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 MESP2Q0VG99 397 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CSTF3Q12996 717 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 CHIT1Q13231 466 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 LRRC32Q14392 662 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 KRT33BQ14525 404 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 COL19A1Q14993 1142 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CYP2A13Q16696 494 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TMEM196Q5HYL7 178 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 C6orf136Q5SQH8 315 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ZNF648Q5T619 568 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 THEMIS2Q5TEJ8 643 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3GQ6DHY5 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3CQ6IPX1 549 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 LETMD1Q6P1Q0 360 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RIPOR1Q6ZS17 1223 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 THOC6Q86W42 341 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 ZFAND4Q86XD8 727 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CACUL1Q86Y37 369 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D3Q8IZP1 549 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 L3MBTL4Q8NA19 623 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 OR52B6Q8NGF0 335 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SETD7Q8WTS6 366 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 SPDL1Q96EA4 605 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CCDC97Q96F63 343 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 METTL2AQ96IZ6 378 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TIMM29Q9BSF4 260 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 HAUS8Q9BT25 410 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms