RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 NSUN5Q96P11 429 aaKnown RBP16.48■□□□□ 0.23
PMS1-213ENST00000441310 CDADC1Q9BWV3 514 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 LRRC3Q9BY71 257 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 ORC6Q9Y5N6 252 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 DSCR3O14972 297 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 AZIN1O14977 448 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 SEPT4O43236 478 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 CDK14O94921 469 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 NAT2P11245 290 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 SLC15A1P46059 708 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 LHX1P48742 406 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 UPP1Q16831 310 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 SPANXN2Q5MJ10 180 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 AHSA2Q719I0 299 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 EFL1Q7Z2Z2 1120 aaKnown RBP16.48■□□□□ 0.23
PMS1-213ENST00000441310 RAB43Q86YS6 212 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 GLB1L3Q8NCI6 653 aaPredicted RBP16.48■□□□□ 0.23
PMS1-213ENST00000441310 PMEPA1Q969W9 287 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 RNF170Q96K19 258 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 ROGDIQ9GZN7 287 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 ACOXLQ9NUZ1 547 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 TEKT2Q9UIF3 430 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 BPTFQ12830 3046 aa16.48■□□□□ 0.23
PMS1-213ENST00000441310 CA12O43570 354 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 MYCP01106 439 aaPredicted RBP16.47■□□□□ 0.23
PMS1-213ENST00000441310 PFKLP17858 780 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 STARD3Q14849 445 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 PLA2G4EQ3MJ16 856 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SDHAF4Q5VUM1 108 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SLC22A9Q8IVM8 553 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SPATA22Q8NHS9 363 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 KIFC1Q9BW19 673 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 DUSP21Q9H596 190 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 ZFP14Q9HCL3 533 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 RASSF1Q9NS23 344 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 LEF1Q9UJU2 399 aaPredicted RBP16.47■□□□□ 0.23
PMS1-213ENST00000441310 AGO1Q9UL18 857 aaKnown RBP16.47■□□□□ 0.23
PMS1-213ENST00000441310 SLC12A8A0AV02 714 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 JCHAINP01591 159 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 IDO2Q6ZQW0 420 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 NUDT8Q8WV74 236 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 A0A0U1RQS6 177 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 GSTA4O15217 222 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 IGHA2P01877 340 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 CYBBP04839 570 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 PGFP49763 221 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 TPI1P60174 286 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 PRKCDQ05655 676 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 GPR50Q13585 617 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SPATS1Q496A3 300 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SMYD5Q6GMV2 418 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 PKN3Q6P5Z2 889 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 OR10T2Q8NGX3 314 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 TM9SF3Q9HD45 589 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 UCKL1Q9NWZ5 548 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 GPR45Q9Y5Y3 372 aa16.47■□□□□ 0.23
PMS1-213ENST00000441310 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 LOC110117498-PIK3R3F6TDL0 507 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 CAPN5O15484 640 aaPredicted RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 AOC2O75106 756 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 IL7P13232 177 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 RYKP34925 604 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 EMX2Q04743 252 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 GPR158Q5T848 1215 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 SYCE2Q6PIF2 218 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 Q96MT0 163 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 TKTL2Q9H0I9 626 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 POLHQ9Y253 713 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 PDCD11Q14690 1871 aaKnown RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 MEIOCA2RUB1 952 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 H3BQ06 376 aaPredicted RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 B4GALT3O60512 393 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 CRCPO75575 148 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 SNRPD2P62316 118 aaKnown RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 POU4F1Q01851 419 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 GALNT1Q10472 559 aaPredicted RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 RCAN2Q14206 197 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 PRSS36Q5K4E3 855 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 EID3Q8N140 333 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 TMEM199Q8N511 208 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 NPWQ8N729 165 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 IPMKQ8NFU5 416 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 OR10Q1Q8NGQ4 319 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 KCTD13Q8WZ19 329 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 SLC38A4Q969I6 547 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 SLC47A1Q96FL8 570 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 GDF15Q99988 308 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 TRMOQ9BU70 441 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 MMP28Q9H239 520 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 ACTR8Q9H981 624 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 TBC1D24Q9ULP9 559 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.23
PMS1-213ENST00000441310 SNX8Q9Y5X2 465 aa16.46■□□□□ 0.23
PMS1-213ENST00000441310 A0A1B0GTL3 188 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms