RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PCDH8O95206 1070 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 KLF8O95600 359 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MLYCDO95822 493 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 EGFP01133 1207 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SERPINA6P08185 405 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FGF4P08620 206 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HIST1H2AGP0C0S8 130 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 KITP10721 976 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ACADMP11310 421 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SRFP11831 508 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 C6P13671 934 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MTHFD2P13995 350 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HOXB2P14652 356 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 EZRP15311 586 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 VCLP18206 1134 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MAP4P27816 1152 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ADSLP30566 484 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 DRD3P35462 400 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 WASP42768 502 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 GPR1P46091 355 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SOX9P48436 509 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 KCNC1P48547 511 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PIK3CGP48736 1102 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HNMTP50135 292 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MNAT1P51948 309 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PGGT1BP53609 377 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PKNOX1P55347 436 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 AP1S2P56377 157 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 IRX1P78414 480 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CDKL1Q00532 357 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 B4GALNT1Q00973 533 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RPL6Q02878 288 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PRKCQQ04759 706 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CDC16Q13042 620 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LCP2Q13094 533 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LRRC32Q14392 662 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 KRT72Q14CN4 511 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PON2Q15165 354 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PCBP2Q15366 365 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TSNQ15631 228 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PFKFB4Q16877 469 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 POM121L1PQ3SYA9 428 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LEXMQ3ZCV2 418 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 BCL7AQ4VC05 210 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SYTL3Q4VX76 610 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC44A4Q53GD3 710 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ARL13AQ5H913 290 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ZNF678Q5SXM1 525 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PIP5KL1Q5T9C9 394 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CES4AQ5XG92 561 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM91A1Q658Y4 838 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ANKS6Q68DC2 871 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 NAIF1Q69YI7 327 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SULT1C3Q6IMI6 304 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM220Q6QAJ8 160 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 EPGNQ6UW88 154 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RFLNAQ6ZTI6 216 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 BEND4Q6ZU67 534 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FRMD7Q6ZUT3 714 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MTDHQ86UE4 582 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMPRSS6Q8IU80 811 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SFTPA1Q8IWL2 248 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CPNE9Q8IYJ1 553 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CLYBLQ8N0X4 340 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 LSMEM2Q8N112 164 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TCAIMQ8N3R3 496 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SYNPOQ8N3V7 929 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HDDC3Q8N4P3 179 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 AADATQ8N5Z0 425 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FITM2Q8N6M3 262 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 IL17RCQ8NAC3 791 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 OR56A4Q8NGH8 313 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MCOLN3Q8TDD5 553 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ATL1Q8WXF7 558 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 ASB12Q8WXK4 309 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FUBP1Q96AE4 644 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM131CQ96AQ9 280 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 TMEM159Q96B96 161 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FAM136AQ96C01 138 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 PHF21BQ96EK2 531 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 THOC1Q96FV9 657 aaKnown RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SHDQ96IW2 340 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HIC2Q96JB3 615 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HIST1H2AHQ96KK5 128 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 MAGEB10Q96LZ2 347 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 FOPNLQ96NB1 174 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 NELL2Q99435 816 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CCT7Q99832 543 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 HIST1H2AJQ99878 128 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 H2AFJQ9BTM1 129 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 YIPF2Q9BWQ6 316 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 BOCQ9BWV1 1114 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 SLC12A9Q9BXP2 914 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RMI1Q9H9A7 625 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 KCNK13Q9HB14 408 aa3.89□□□□□ -1.79
HMGB1P37-201ENST00000439613 RDH14Q9HBH5 336 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms