RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 CCDC138Q96M89 665 aa22.69■■□□□ 1.22
LONRF3-204ENST00000439603 IMP3Q9NV31 184 aaKnown RBP22.69■■□□□ 1.22
LONRF3-204ENST00000439603 SPASTQ9UBP0 616 aa22.69■■□□□ 1.22
LONRF3-204ENST00000439603 SNX11Q9Y5W9 270 aa22.69■■□□□ 1.22
LONRF3-204ENST00000439603 ZFC3H1O60293 1989 aaKnown RBP22.69■■□□□ 1.22
LONRF3-204ENST00000439603 KNL1Q8NG31 2342 aa22.69■■□□□ 1.22
LONRF3-204ENST00000439603 OR52A4PA6NMU1 304 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TCP11X1B4DZS4 312 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 SIX3O95343 332 aaPredicted RBP22.68■■□□□ 1.22
LONRF3-204ENST00000439603 F3P13726 295 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 AGTR2P50052 363 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 CBX1P83916 185 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 BST1Q10588 318 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 FBXO48Q5FWF7 155 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 ZNF678Q5SXM1 525 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 DCUN1D3Q8IWE4 304 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TBC1D21Q8IYX1 336 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 FERD3LQ96RJ6 166 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 PKP4Q99569 1192 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TRIT1Q9H3H1 467 aaKnown RBP22.68■■□□□ 1.22
LONRF3-204ENST00000439603 ACSS2Q9NR19 701 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TAPBPO15533 448 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 EEF1DP29692 281 aaKnown RBP22.68■■□□□ 1.22
LONRF3-204ENST00000439603 HNMTP50135 292 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 BNC1Q01954 994 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 LPAL2Q16609 132 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 CFAP157Q5JU67 520 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 DUS1LQ6P1R4 473 aaKnown RBP22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TCAIMQ8N3R3 496 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 LMX1AQ8TE12 382 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 ESAMQ96AP7 390 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 RAD51AP1Q96B01 352 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 WWOXQ9NZC7 414 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 TNPO3Q9Y5L0 923 aaKnown RBP22.68■■□□□ 1.22
LONRF3-204ENST00000439603 HEBP2Q9Y5Z4 205 aa22.68■■□□□ 1.22
LONRF3-204ENST00000439603 MYO1CO00159 1063 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 SHOX2O60902 331 aaPredicted RBP22.67■■□□□ 1.22
LONRF3-204ENST00000439603 DUOXA1Q1HG43 343 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 C18orf21Q32NC0 220 aaPredicted RBP22.67■■□□□ 1.22
LONRF3-204ENST00000439603 RABEPKQ7Z6M1 372 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 OR9A1PQ8NGU1 263 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 CEP76Q8TAP6 659 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 FBXL8Q96CD0 374 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 CIDEBQ9UHD4 219 aa22.67■■□□□ 1.22
LONRF3-204ENST00000439603 LRRC14BA6NHZ5 514 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 SUPT7LO94864 414 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 MTHFD1P11586 935 aaKnown RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 PRKG2Q13237 762 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 KRT33BQ14525 404 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 PCBP2Q15366 365 aaKnown RBP eCLIP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 UNC50Q53HI1 259 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 IYDQ6PHW0 289 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 GKN2Q86XP6 184 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ZNF317Q96PQ6 595 aaPredicted RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 TMEM79Q9BSE2 394 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 C1QTNF3Q9BXJ4 246 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 MVB12BQ9H7P6 319 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 TDRKHQ9Y2W6 561 aaKnown RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 TDRD6O60522 2096 aaKnown RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 TMEM114B3SHH9 223 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 AQP9O43315 295 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 CFIP05156 583 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 GGT5P36269 586 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 SLC1A6P48664 564 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 HSPA7P48741 367 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ABCE1P61221 599 aaKnown RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ANKS6Q68DC2 871 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ZNF548Q8NEK5 533 aaPredicted RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 FAM46DQ8NEK8 389 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ATL1Q8WXF7 558 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 CNDP1Q96KN2 507 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ELF4Q99607 663 aaPredicted RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 C20orf27Q9GZN8 174 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 DRC3Q9H069 523 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 SLCO1B3Q9NPD5 702 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 THAP1Q9NVV9 213 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 STOX2Q9P2F5 926 aaPredicted RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ZNF624Q9P2J8 865 aaPredicted RBP22.66■■□□□ 1.22
LONRF3-204ENST00000439603 ASB1Q9Y576 335 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 COLEC10Q9Y6Z7 277 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 R4GN57 208 aa22.66■■□□□ 1.22
LONRF3-204ENST00000439603 FANCMQ8IYD8 2048 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 WDFY4Q6ZS81 3184 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 ITM2AO43736 263 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 NPHS1O60500 1241 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 SNNO75324 88 aaPredicted RBP22.65■■□□□ 1.22
LONRF3-204ENST00000439603 PIAS2O75928 621 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 SLC16A8O95907 504 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 VIMP08670 466 aaKnown RBP22.65■■□□□ 1.22
LONRF3-204ENST00000439603 RPS17P08708 135 aaKnown RBP22.65■■□□□ 1.22
LONRF3-204ENST00000439603 GRB7Q14451 532 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 ZXDCQ2QGD7 858 aaPredicted RBP22.65■■□□□ 1.22
LONRF3-204ENST00000439603 ZC3H14Q6PJT7 736 aaKnown RBP22.65■■□□□ 1.22
LONRF3-204ENST00000439603 SDR16C5Q8N3Y7 309 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 PPP4R1Q8TF05 950 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 UBTD2Q8WUN7 234 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 CHMP6Q96FZ7 201 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 HGH1Q9BTY7 390 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 CD244Q9BZW8 370 aa22.65■■□□□ 1.22
LONRF3-204ENST00000439603 ZNF395Q9H8N7 513 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms