RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 GNPDA1P46926 289 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 PGFP49763 221 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 RGS4P49798 205 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 PTPRRQ15256 657 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 FAM214AQ32MH5 1076 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 COQ5Q5HYK3 327 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 AFTPHQ6ULP2 937 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 VTCN1Q7Z7D3 282 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 B3GNT8Q7Z7M8 397 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CYP4Z1Q86W10 505 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CELF2-AS1Q8N7Q2 184 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 C3orf58Q8NDZ4 430 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 FBXO32Q969P5 355 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 CNDP2Q96KP4 475 aaKnown RBP8.88□□□□□ -0.99
COPB1-202ENST00000439561 TTYH2Q9BSA4 534 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 TRIT1Q9H3H1 467 aaKnown RBP8.88□□□□□ -0.99
COPB1-202ENST00000439561 IKZF5Q9H5V7 419 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NMUR1Q9HB89 426 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 NECTIN3Q9NQS3 549 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 C1orf109Q9NX04 203 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 ADPRHL2Q9NX46 363 aa8.88□□□□□ -0.99
COPB1-202ENST00000439561 A0A096LPI6 279 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PNMA8CA0A1B0GUJ8 204 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 AXIN1O15169 862 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 UPK1BO75841 260 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 C21orf33P30042 268 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 GRK4P32298 578 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GRK3P35626 688 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GPR15P49685 360 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 MLLT6P55198 1093 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 GABARAPL2P60520 117 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PDE12Q6L8Q7 609 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 Q6ZPB1 254 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 Q6ZSR9 355 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GOLGA7Q7Z5G4 137 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 SLC22A15Q8IZD6 547 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RHEBL1Q8TAI7 183 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 TSPEARQ8WU66 669 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ZNF641Q96N77 438 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 PANX1Q96RD7 426 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 DERL2Q9GZP9 239 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 POLR3BQ9NW08 1133 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 RNF6Q9Y252 685 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 TESMINQ9Y4I5 508 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 COL1A2P08123 1366 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 EFCAB10A6NFE3 127 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 SAGE2PA6NJ88 616 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ZW10O43264 779 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 DYRK3O43781 588 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 NUAK1O60285 661 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GUCY1B2O75343 617 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GPR32O75388 356 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 GABARAPO95166 117 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 HPRP00739 348 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 IRF1P10914 325 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 KCNE1P15382 129 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 CTSKP43235 329 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 INPP1P49441 399 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ARPC4P59998 168 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ISL1P61371 349 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 MXD1Q05195 221 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RUNX1T1Q06455 604 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 CSTF3Q12996 717 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 TAF12Q16514 161 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PLEKHG6Q3KR16 790 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PIK3R6Q5UE93 754 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 ZNF691Q5VV52 312 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 TAPT1Q6NXT6 567 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 MSANTD2Q6P1R3 559 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 ZNF605Q86T29 641 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 OR6K2Q8NGY2 324 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RHOXF1Q8NHV9 184 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 APOLD1Q96LR9 279 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 BARD1Q99728 777 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 EBPLQ9BY08 206 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 RNF167Q9H6Y7 350 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 CCNB1IP1Q9NPC3 277 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 FAM105AQ9NUU6 356 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 MARCH2Q9P0N8 246 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 KLHL20Q9Y2M5 609 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 M0R129 80 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 NDST3O95803 873 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 TGM1P22735 817 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PAX3P23760 479 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 HUNKP57058 714 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 NFKB2Q00653 900 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 LRRC74AQ0VAA2 488 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 KRR1Q13601 381 aaKnown RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 INO80DQ53TQ3 878 aaPredicted RBP8.87□□□□□ -0.99
COPB1-202ENST00000439561 ARMCX4Q5H9R4 360 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 OR2T5Q6IEZ7 315 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 PSAPL1Q6NUJ1 521 aa8.87□□□□□ -0.99
COPB1-202ENST00000439561 FBXL22Q6P050 247 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms