RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ARHGEF11O15085 1522 aa3.29□□□□□ -1.88
VPS41-207ENST00000439468 A0A1W2PPQ1 181 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 A0A1W2PRQ8 180 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 C15orf62A8K5M9 175 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CYSRT1A8MQ03 144 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 E9PI62 339 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PTGESO14684 152 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CAPN9O14815 690 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 ATP5BP06576 529 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 QDPRP09417 244 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 FDPSP14324 419 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 TCF4P15884 667 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 IFNAR1P17181 557 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 MSH3P20585 1137 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 NPY4RP50391 375 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CDH11P55287 796 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PPIGQ13427 754 aaKnown RBP eCLIP3.28□□□□□ -1.88
VPS41-207ENST00000439468 ZNF273Q14593 569 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PTPRCAPQ14761 206 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 NR1D2Q14995 579 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 ALDH1L2Q3SY69 923 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CAVIN1Q6NZI2 390 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CORO6Q6QEF8 472 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PACS1Q6VY07 963 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 GDPD4Q6W3E5 623 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CCDC186Q7Z3E2 898 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 ARHGAP22Q7Z5H3 698 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CFAP206Q8IYR0 622 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 CCAR2Q8N163 923 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 CPSF7Q8N684 471 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 PAPD5Q8NDF8 572 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 MOSPD2Q8NHP6 518 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 SYN2Q92777 582 aaPredicted RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 HES6Q96HZ4 224 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 ABHD8Q96I13 439 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 FEVQ99581 238 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 KATNB1Q9BVA0 655 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 VN1R1Q9GZP7 353 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 FZD8Q9H461 694 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 APOBEC3GQ9HC16 384 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 SDF2L1Q9HCN8 221 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 A4GALTQ9NPC4 353 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PIH1D3Q9NQM4 214 aaKnown RBP3.28□□□□□ -1.88
VPS41-207ENST00000439468 MTUS1Q9ULD2 1270 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 JRKLQ9Y4A0 524 aa3.28□□□□□ -1.88
VPS41-207ENST00000439468 PCDH11YQ9BZA8 1340 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 IGLV5-45A0A087WSX0 123 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 OR6C76A6NM76 312 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 DVL1O14640 695 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 SYNGR3O43761 229 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 RECQL5O94762 991 aaPredicted RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 WDPCPO95876 746 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 CRYAAP02489 173 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ATP1A1P05023 1023 aaKnown RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 H1F0P07305 194 aaKnown RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 RAB40ALP0C0E4 278 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 CD22P20273 847 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 TLX1P31314 330 aaPredicted RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 HSPA4P34932 840 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 MTHFRP42898 656 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 CRKLP46109 303 aaKnown RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 SLC9A3P48764 834 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ZNF75DP51815 510 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 TERF1P54274 439 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 MLLT10P55197 1068 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 UBASH3AP57075 661 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 B3GALT5-AS1P59052 145 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ZNF415Q09FC8 603 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ARL16Q0P5N6 197 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 TFCP2Q12800 502 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 SYT14P1Q58G82 188 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 PDSS1Q5T2R2 415 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 C1QTNF12Q5T7M4 302 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 MFSD12Q6NUT3 480 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 FOXL2NBQ6ZUU3 175 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ANKRD23Q86SG2 305 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 GLRX5Q86SX6 157 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 TMEM139Q8IV31 216 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 MFN1Q8IWA4 741 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 DCUN1D3Q8IWE4 304 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 FAM9BQ8IZU0 186 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 DNAJC22Q8N4W6 341 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 TRIML1Q8N9V2 468 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 SLC24A4Q8NFF2 622 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 RDM1Q8NG50 284 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 GOT1L1Q8NHS2 421 aaPredicted RBP3.27□□□□□ -1.89
VPS41-207ENST00000439468 ARSGQ96EG1 525 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 MUS81Q96NY9 551 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 UHRF2Q96PU4 802 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 CPNE1Q99829 537 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 BTBD10Q9BSF8 475 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ARRDC1-AS1Q9H2J1 176 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 GRPEL1Q9HAV7 217 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 SERINC1Q9NRX5 453 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ABCF3Q9NUQ8 709 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 DPP3Q9NY33 737 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 LRWD1Q9UFC0 647 aa3.27□□□□□ -1.89
VPS41-207ENST00000439468 ABT1Q9ULW3 272 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms