RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PTSQ03393 145 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 RCAN2Q14206 197 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 GLYATQ6IB77 296 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CRTC1Q6UUV9 634 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 MINDY1Q8N5J2 469 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 LILRA3Q8N6C8 439 aaPredicted RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 OR2AP1Q8NGE2 309 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 FBXO30Q8TB52 745 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ROPN1LQ96C74 230 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 BIRC7Q96CA5 298 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CCT7Q99832 543 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 POPDC3Q9HBV1 291 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CCM2LQ9NUG4 571 aaPredicted RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 GID8Q9NWU2 228 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 MRPS23Q9Y3D9 190 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 COMMD3-BMI1R4GMX3 469 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 U3KQV3 271 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 LSM1O15116 133 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 SNAP29O95721 258 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 RB1P06400 928 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 PABPC4LP0CB38 370 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 ZNF23P17027 643 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 IL10P22301 178 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 PRKACGP22612 351 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 PSMA4P25789 261 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 RPL5P46777 297 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 ERVK-8P63133 956 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CREMQ03060 361 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 TRAP1Q12931 704 aaKnown RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 PRKG2Q13237 762 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 LSAMPQ13449 338 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 NHSL2Q5HYW2 709 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 SPANXN4Q5MJ08 99 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 GALNT10Q86SR1 603 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CACUL1Q86Y37 369 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 SFTPA1Q8IWL2 248 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 FAM217AQ8IXS0 508 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ADGRG5Q8IZF4 528 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 TSPAN14Q8NG11 270 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 CDC26Q8NHZ8 85 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 IRF7Q92985 503 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ACDQ96AP0 544 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 MAGEE1Q9HCI5 957 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ARL15Q9NXU5 204 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ZNF490Q9ULM2 529 aaPredicted RBP9.27□□□□□ -0.93
CUX1-206ENST00000437600 PFDN6O15212 129 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 IGSF6O95976 241 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 HRH2P25021 359 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TACR1P25103 407 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 FASP25445 335 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CCR7P32248 378 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 PSMD8P48556 350 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 B4GALNT1Q00973 533 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TRAF3Q13114 568 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 LAPTM4AQ15012 233 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 XKR7Q5GH72 579 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 MIPOL1Q8TD10 442 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 NCSTNQ92542 709 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ZNF707Q96C28 371 aaPredicted RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 ZNF597Q96LX8 424 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TSSK3Q96PN8 268 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CHID1Q9BWS9 393 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TMEM202A6NGA9 273 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 STX16O14662 325 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 KLK8O60259 260 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ULK1O75385 1050 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 TNFAIP8O95379 198 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 PABPC1P11940 636 aaKnown RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 IGFBP4P22692 258 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 RPIAP49247 311 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CASP9P55211 416 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 UBE3AQ05086 875 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 DDX39BQ13838 428 aaKnown RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 C22orf39Q6P5X5 142 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 SUSD1Q6UWL2 747 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 DLEU7Q6UYE1 221 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 GCNT7Q6ZNI0 430 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ERMP1Q7Z2K6 904 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 CHERPQ8IWX8 916 aaKnown RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 RGL4Q8IZJ4 473 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 DTWD1Q8N5C7 304 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 SMG7Q92540 1137 aaKnown RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 ULK4Q96C45 1275 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 RSPRY1Q96DX4 576 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ITCHQ96J02 903 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 DHRS1Q96LJ7 313 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ATP13A3Q9H7F0 1226 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 HPS4Q9NQG7 708 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 SPHK2Q9NRA0 654 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 ABCD2Q9UBJ2 740 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 OTOL1A6NHN0 477 aaPredicted RBP9.26□□□□□ -0.93
CUX1-206ENST00000437600 NOBOXO60393 691 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 MATN4O95460 622 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 LATS1O95835 1130 aa9.26□□□□□ -0.93
CUX1-206ENST00000437600 PRR35P0CG20 571 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms