RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 FKBPLQ9UIM3 349 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 ILVBLA1L0T0 632 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 TBKBP1A7MCY6 615 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 TAF4O00268 1085 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 PRSS23O95084 383 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 DGKAP23743 735 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 GGT5P36269 586 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 COPZ1P61923 177 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 DAB2P98082 770 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 SERINC3Q13530 473 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 TYSND1Q2T9J0 566 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 CES5AQ6NT32 575 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 PHACTR4Q8IZ21 702 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 SLC38A4Q969I6 547 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 EXOSC4Q9NPD3 245 aaKnown RBP10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 DCAF13Q9NV06 445 aaKnown RBP10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 AFF4Q9UHB7 1163 aaKnown RBP10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 IFT52Q9Y366 437 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 PEX16Q9Y5Y5 336 aa10.56□□□□□ -0.72
ATP2C1-204ENST00000428331 A0A1B0GTL3 188 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 M0QX08 132 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PDHXO00330 501 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 RGS5O15539 181 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FABP3P05413 133 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PRSS56P0CW18 603 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FPR1P21462 350 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 CTSKP43235 329 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MRPS6P82932 125 aaKnown RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ABHD18Q0P651 414 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 SEMA3AQ14563 771 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PLA2G4EQ3MJ16 856 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 CIR1Q86X95 450 aaPredicted RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF548Q8NEK5 533 aaPredicted RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 SELENOMQ8WWX9 145 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 KCNJ9Q92806 393 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FFAR2O15552 330 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 UPK1BO75841 260 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 IGLV3-25P01717 112 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ACVRL1P37023 503 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ACVR1Q04771 509 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 RUNX1T1Q06455 604 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 CD300CQ08708 224 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PRAMEF19Q5SWL8 479 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ARMC4Q5T2S8 1044 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 SLC16A12Q6ZSM3 486 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF605Q86T29 641 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FAM86B1Q8N7N1 296 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FKBP10Q96AY3 582 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PCDHB14Q9Y5E9 798 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 PCDHB1Q9Y5F3 818 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MEIS3P2A8K0S8 358 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ARVCFO00192 962 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 UPK1AO00322 258 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 NUAK1O60285 661 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MRPS14O60783 128 aaKnown RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MITFO75030 526 aaPredicted RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 EPN2O95208 641 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 CCNDBP1O95273 360 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ALDH2P05091 517 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ITGAMP11215 1152 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MYCLP1P12525 358 aaPredicted RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 OLR1P78380 273 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF45Q02386 682 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 KCNC4Q03721 635 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 TUSC3Q13454 348 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ANGPTL8Q6UXH0 198 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF621Q6ZSS3 439 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 OR10Q1Q8NGQ4 319 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 FATE1Q969F0 183 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 MTFMTQ96DP5 389 aaKnown RBP10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 TPD52L3Q96J77 140 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 TM9SF3Q9HD45 589 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 LTB4R2Q9NPC1 389 aa10.55□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CENPXA8MT69 81 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 DYRK3O43781 588 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PRAMEF11O60813 436 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 HIST1H2AGP0C0S8 130 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 HIST1H2ADP20671 130 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PPP3CCP48454 512 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 RPS14P62263 151 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ZNF177Q13360 481 aaPredicted RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 ABRAXAS2Q15018 415 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 CPSF6Q16630 551 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 SHQ1Q6PI26 577 aaKnown RBP10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 PRSS48Q7RTY5 328 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 GPR142Q7Z601 462 aa10.54□□□□□ -0.72
ATP2C1-204ENST00000428331 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms