RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MUC13Q9H3R2 512 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 ACTL8Q9H568 366 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 DNAJC11Q9NVH1 559 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 GID8Q9NWU2 228 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 C6orf203Q9P0P8 240 aaPredicted RBP8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 GULP1Q9UBP9 304 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 LEF1Q9UJU2 399 aaPredicted RBP8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 RNF11Q9Y3C5 154 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 FADS3Q9Y5Q0 445 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 ATG2BQ96BY7 2078 aa8.84□□□□□ -0.99
LINCMD1-201ENST00000418518 F5P12259 2224 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 C15orf38-AP3S2A0A0A6YYH1 394 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 C17orf113A0A1B0GUU1 675 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 TCRBV3S1A0A5B6 114 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PRORSD1PA6NEY8 169 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 TMEM202A6NGA9 273 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 LOC730098B7Z3J9 87 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 NME4O00746 187 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 CFLARO15519 480 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 RGS14O43566 566 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 VEGFDO43915 354 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PEX1O43933 1283 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SLC22A3O75751 556 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 RSL1D1O76021 490 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 CLDN9O95484 217 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 KRT6AP02538 564 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 CATP04040 527 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 KRT6BP04259 564 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 APODP05090 189 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 HIST1H2AGP0C0S8 130 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 HIST1H2ADP20671 130 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SLC6A2P23975 617 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 P2RY2P41231 377 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 KRT6CP48668 564 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 POLR2JP52435 117 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 HNRNPFP52597 415 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 KCNK10P57789 538 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SESN3P58005 492 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 UFM1P61960 85 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PLOD1Q02809 727 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 BNIP2Q12982 314 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PRKG2Q13237 762 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 KIAA0040Q15053 153 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 RPS6KA2Q15349 733 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 NR6A1Q15406 480 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 TAF11Q15544 211 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PTCHD3Q3KNS1 767 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 ITPRIPL2Q3MIP1 535 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 POM121L1PQ3SYA9 428 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 VPS26BQ4G0F5 336 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 EGFLAMQ63HQ2 1017 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 NEK5Q6P3R8 708 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 CYP20A1Q6UW02 462 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SCIMPQ6UWF3 145 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 ARPINQ7Z6K5 226 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SLC15A3Q8IY34 581 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 KBTBD2Q8IY47 623 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 YAF2Q8IY57 180 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PQLC1Q8N2U9 271 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 BEND7Q8N7W2 519 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 FNDC5Q8NAU1 212 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 GLB1L3Q8NCI6 653 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 PPFIBP2Q8ND30 876 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 SLC26A7Q8TE54 656 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 ZUFSPQ96AP4 578 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 TMEM159Q96B96 161 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 METTL2AQ96IZ6 378 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 HIST1H2AHQ96KK5 128 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 CCDC138Q96M89 665 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 HHIPQ96QV1 700 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 ZNF184Q99676 751 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 HIST1H2AJQ99878 128 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 P2RY13Q9BPV8 354 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 H2AFJQ9BTM1 129 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 WRAP53Q9BUR4 548 aaKnown RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 RSPH9Q9H1X1 276 aaPredicted RBP8.83□□□□□ -1
LINCMD1-201ENST00000418518 SLC28A3Q9HAS3 691 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 CLEC1BQ9P126 229 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 GPR34Q9UPC5 381 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 PCDHA9Q9Y5H5 950 aa8.83□□□□□ -1
LINCMD1-201ENST00000418518 HEATR5BQ9P2D3 2071 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 TBC1D3BA6NDS4 549 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 PABPN1LA6NDY0 278 aaKnown RBP8.82□□□□□ -1
LINCMD1-201ENST00000418518 OR2AG2A6NM03 316 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 PRAMEF4O60810 478 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 ULK1O75385 1050 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 ADH1BP00325 375 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 LAMP2P13473 410 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 JUPP14923 745 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
LINCMD1-201ENST00000418518 DRD3P35462 400 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 CASP2P42575 452 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 MTHFRP42898 656 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 TNFRSF4P43489 277 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 GPR1P46091 355 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 GNPDA1P46926 289 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 SLC7A2P52569 658 aa8.82□□□□□ -1
LINCMD1-201ENST00000418518 EEFSECP57772 596 aaKnown RBP8.82□□□□□ -1
LINCMD1-201ENST00000418518 PFN3P60673 137 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms