RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
PTCH1-205ENST00000418258 A0A0G2JN53 185 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 DYTNA2CJ06 578 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF20P17024 532 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 GJA1P17302 382 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 DRG2P55039 364 aaKnown RBP11.03□□□□□ -0.64
PTCH1-205ENST00000418258 ELF3P78545 371 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-205ENST00000418258 MON1BQ7L1V2 547 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 ALG2Q9H553 416 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 ASB3Q9Y575 518 aa11.03□□□□□ -0.64
PTCH1-205ENST00000418258 A0A0U1RQJ8 604 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 ALOX15BO15296 676 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 SLC1A5Q15758 541 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 FAM129BQ96TA1 746 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 HNRNPABQ99729 332 aaKnown RBP11.02□□□□□ -0.64
PTCH1-205ENST00000418258 YIPF4Q9BSR8 244 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 TRIM39Q9HCM9 518 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 STOML2Q9UJZ1 356 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.64
PTCH1-205ENST00000418258 KRT36O76013 467 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 DHFRP00374 187 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 CYP17A1P05093 508 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 HOXB2P14652 356 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 CCNOP22674 350 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 CCND3P30281 292 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-205ENST00000418258 HSD17B2P37059 387 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 ADAM8P78325 824 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 GPR68Q15743 365 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 CLIP4Q8N3C7 705 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 OR2T34Q8NGX1 318 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 OR2T3Q8NH03 318 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 C1orf216Q8TAB5 229 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 HAPLN3Q96S86 360 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 FUCA2Q9BTY2 467 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.64
PTCH1-205ENST00000418258 TESMINQ9Y4I5 508 aa11.02□□□□□ -0.64
PTCH1-205ENST00000418258 PLK4O00444 970 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ECHS1P30084 290 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 GRASPQ7Z6J2 395 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF514Q96K75 400 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 PRR5-ARHGAP8B1AHC4 643 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ADAMDEC1O15204 470 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 IRAK2O43187 625 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 LRCH4O75427 683 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ARHGAP8P85298 464 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 GRM2Q14416 872 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 SLC44A1Q8WWI5 657 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 MFSD3Q96ES6 412 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 BTBD1Q9H0C5 482 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 RSL24D1Q9UHA3 163 aaKnown RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 DGKBQ9Y6T7 804 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 KHNYNO15037 678 aaKnown RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 RGS10O43665 173 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF3P17036 446 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 SEPHS1P49903 392 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CD47Q08722 323 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 LCP2Q13094 533 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 REP15Q6BDI9 236 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 RGMAQ96B86 450 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF717Q9BY31 904 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 B3GNT4Q9C0J1 378 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 SEC61A2Q9H9S3 476 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 ADAP2Q9NPF8 381 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 hCG_2039718K7EN88 272 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CDC7O00311 574 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 RB1P06400 928 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CD2P06729 351 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 NELFEP18615 380 aaKnown RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 TNFAIP8L2Q6P589 184 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CCDC80Q76M96 950 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 NANOGNBQ7Z5D8 188 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 PNLDC1Q8NA58 520 aaKnown RBP11.02□□□□□ -0.65
PTCH1-205ENST00000418258 TESCQ96BS2 214 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CYP2S1Q96SQ9 504 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 SUV39H2Q9H5I1 410 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 TCF7L1Q9HCS4 588 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 B3GAT2Q9NPZ5 323 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
PTCH1-205ENST00000418258 CCNB2O95067 398 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 PRAMEF12O95522 483 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TGFB1P01137 390 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 CD48P09326 243 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 RPL10P27635 214 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 CDKN2BP42772 138 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 CDH12P55289 794 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 BTN3A2P78410 334 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ABCA11PQ4W5N1 156 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 OR4K17Q8NGC6 315 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 OR10A6Q8NH74 314 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 DNAJA4Q8WW22 397 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 STRADBQ9C0K7 418 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms