RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 DNTTP04053 509 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 GLULP15104 373 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 CD1EP15812 388 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SEC13P55735 322 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 RPS21P63220 83 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 MRPS21P82921 87 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 PCDH1Q08174 1060 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 GRSF1Q12849 480 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SFSWAPQ12872 951 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 MAP7D1Q3KQU3 841 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 C2orf27AQ580R0 203 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 REP15Q6BDI9 236 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 AAGABQ6PD74 315 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SNX31Q8N9S9 440 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 IL17RCQ8NAC3 791 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 FNDC5Q8NAU1 212 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 GULP1Q9UBP9 304 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SNX6Q9UNH7 406 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 A0A1W2PP55 124 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SERTM1A2A2V5 107 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 RNASEH2AO75792 299 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 POP7O75817 140 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 PSMG1O95456 288 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 ZNF8P17098 575 aaPredicted RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 EPORP19235 508 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 PREPP48147 710 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 HTR6P50406 440 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 CDK3Q00526 305 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 ABRAXAS2Q15018 415 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 NR6A1Q15406 480 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 WSCD2Q2TBF2 565 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 LRIT3Q3SXY7 679 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 TCHHL1Q5QJ38 904 aaPredicted RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 LIPJQ5W064 366 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 BLOC1S3Q6QNY0 202 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 TRIM74Q86UV6 250 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 HEATR4Q86WZ0 1026 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 CFAP206Q8IYR0 622 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 SFRP1Q8N474 314 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 MSANTD3Q96H12 275 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 CDRT15Q96T59 188 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 NPAS2Q99743 824 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 TEX101Q9BY14 249 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 FBXL12Q9NXK8 326 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 NOP53Q9NZM5 478 aaKnown RBP16.37■□□□□ 0.21
SSBP3-205ENST00000417664 KLQ9UEF7 1012 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 POMPQ9Y244 141 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 RNF11Q9Y3C5 154 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 CCL27Q9Y4X3 112 aa16.37■□□□□ 0.21
SSBP3-205ENST00000417664 MANBAO00462 879 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 FBP2O00757 339 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 MRASO14807 208 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 PLRG1O43660 514 aaKnown RBP16.36■□□□□ 0.21
SSBP3-205ENST00000417664 TRIM23P36406 574 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 DIO3P55073 304 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 ZXDCQ2QGD7 858 aaPredicted RBP16.36■□□□□ 0.21
SSBP3-205ENST00000417664 AP5B1Q2VPB7 878 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 PIGGQ5H8A4 983 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.36■□□□□ 0.21
SSBP3-205ENST00000417664 NEK5Q6P3R8 708 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 SCIMPQ6UWF3 145 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 ZNF547Q8IVP9 402 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 PLA2G15Q8NCC3 412 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 OR9I1Q8NGQ6 314 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 C1QTNF2Q9BXJ5 285 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 ASIC5Q9NY37 505 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 STX18Q9P2W9 335 aaKnown RBP16.36■□□□□ 0.21
SSBP3-205ENST00000417664 STOML1Q9UBI4 398 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 GIMAP2Q9UG22 337 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 SLC22A14Q9Y267 594 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 PIAS3Q9Y6X2 628 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 C5orf42Q9H799 3197 aa16.36■□□□□ 0.21
SSBP3-205ENST00000417664 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 GRXCR2A6NFK2 248 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 NPIPB8E9PQR5 432 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 IFRD1O00458 451 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 ANGPT2O15123 496 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 SLC22A3O75751 556 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 C1orf105O95561 183 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 HOXB2P14652 356 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 PDHA2P29803 388 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 PBLDP30039 288 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 GNPDA1P46926 289 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 KCNK10P57789 538 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 PFN3P60673 137 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 SGCGQ13326 291 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 RCAN2Q14206 197 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 CCDC6Q16204 474 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 FBXO43Q4G163 708 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 FAM219BQ5XKK7 198 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 PRMT9Q6P2P2 845 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 AGTRAPQ6RW13 159 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 UNC5DQ6UXZ4 953 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 LRRTM4Q86VH4 590 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 HPS6Q86YV9 775 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms