RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TTC23LQ6PF05 361 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 TAS2R42Q7RTR8 314 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 GPR149Q86SP6 731 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 RTN4RL1Q86UN2 441 aaPredicted RBP9.6□□□□□ -0.87
CD44-206ENST00000415148 HIPK1Q86Z02 1210 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 MICU2Q8IYU8 434 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 ZCCHC7Q8N3Z6 543 aaKnown RBP9.6□□□□□ -0.87
CD44-206ENST00000415148 OR10A6Q8NH74 314 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 FBLIM1Q8WUP2 373 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 B3GALT6Q96L58 329 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 NTMT1Q9BV86 223 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 TTLL2Q9BWV7 592 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 DPY30Q9C005 99 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 CLMPQ9H6B4 373 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 PRDM8Q9NQV8 689 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 IL17CQ9P0M4 197 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 WDR37Q9Y2I8 494 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
CD44-206ENST00000415148 MTMR11A4FU01 709 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 FAM220BPB1ANY3 271 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ERN1O75460 977 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 RHOCP08134 193 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 GSTT2P0CG29 244 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 GSTT2BP0CG30 244 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ZNF7P17097 686 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 PCMT1P22061 227 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 RCVRNP35243 200 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 MAP2K4P45985 399 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 HNRNPFP52597 415 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 TRIM16LQ309B1 348 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 NCEH1Q6PIU2 408 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ZNF783Q6ZMS7 281 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 FAM9CQ8IZT9 166 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 C10orf111Q8N326 155 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 PIK3C3Q8NEB9 887 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CNIH3Q8TBE1 160 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 FAM162AQ96A26 154 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 VMP1Q96GC9 406 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 NODALQ96S42 347 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 BARD1Q99728 777 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 CORO1BQ9BR76 489 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 FAM126AQ9BYI3 521 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 AKIP1Q9NQ31 210 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 GIN1Q9NXP7 522 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 KLQ9UEF7 1012 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 TRPS1Q9UHF7 1281 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ENPP5Q9UJA9 477 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 BAG5Q9UL15 447 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ORC6Q9Y5N6 252 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 HSPE1-MOB4S4R3N1 261 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 TRBV5-3A0A0A0MS03 114 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 MANSC4A6NHS7 340 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 KPNA4O00629 521 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 TAPBPO15533 448 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 GPR39O43194 453 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 MITFO75030 526 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 UGT2B11O75310 529 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CREG1O75629 220 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 RECQL5O94762 991 aaPredicted RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 C1QCP02747 245 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 UGT2B4P06133 528 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 PGRP06401 933 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ASGR1P07306 291 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CNPP09543 421 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 EBLN1P0CF75 366 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ITGAMP11215 1152 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 COL6A1P12109 1028 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 DGKAP23743 735 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 HMGCLP35914 325 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 OCA2Q04671 838 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 KCNAB2Q13303 367 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ACOX1Q15067 660 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 PON2Q15165 354 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CARTPTQ16568 116 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ADPRMQ3LIE5 342 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 FAM171A1Q5VUB5 890 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 LYPLAL1Q5VWZ2 237 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 SLC7A5P1Q8MH63 180 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 UBTD2Q8WUN7 234 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 S100ZQ8WXG8 99 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 OVCA2Q8WZ82 227 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 RHBDF1Q96CC6 855 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 BTBD2Q9BX70 525 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 MROQ9BYG7 248 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 CD244Q9BZW8 370 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 NACA2Q9H009 215 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 TRIT1Q9H3H1 467 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 CWH43Q9H720 699 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 ATP13A3Q9H7F0 1226 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 BPIFA1Q9NP55 256 aa9.59□□□□□ -0.87
CD44-206ENST00000415148 SARS2Q9NP81 518 aaKnown RBP9.59□□□□□ -0.87
CD44-206ENST00000415148 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms