RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SLC47A1Q96FL8 570 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 EGLN2Q96KS0 407 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 SLC22A12Q96S37 553 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 ACPTQ9BZG2 426 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 GPRC5BQ9NZH0 403 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CLEC4EQ9ULY5 219 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 U3KQV3 271 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
SS18-203ENST00000415083 KCNE1BA0A087WTH5 132 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ILVBLA1L0T0 632 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 TMEM88BA6NKF7 163 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 GFRA2O00451 464 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 CXCR6O00574 342 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ESR1P03372 595 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PGRP06401 933 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 RXRGP48443 463 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 C21orf59P57076 290 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PHEXP78562 749 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 EMX1Q04741 257 aaPredicted RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 ADPRMQ3LIE5 342 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 IQCCQ4KMZ1 466 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 AASDHQ4L235 1098 aaPredicted RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 GPRC6AQ5T6X5 926 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 TAS2R42Q7RTR8 314 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 GPR155Q7Z3F1 870 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 SERPINA9Q86WD7 417 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ACTR8Q9H981 624 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 IL26Q9NPH9 171 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 SIRT5Q9NXA8 310 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 DNAJB9Q9UBS3 223 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PSME2Q9UL46 239 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ALDH2P05091 517 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 GSNP06396 782 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 MYCLP1P12525 358 aaPredicted RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 MAP2K4P45985 399 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 B4GALNT1Q00973 533 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 BFSP2Q13515 415 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 SMN1Q16637 294 aaKnown RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 RBM48Q5RL73 367 aaKnown RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 BROXQ5VW32 411 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 OR52E4Q8NGH9 312 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PNPT1Q8TCS8 783 aaKnown RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 SH3YL1Q96HL8 342 aaPredicted RBP9.65□□□□□ -0.86
SS18-203ENST00000415083 COX4I2Q96KJ9 171 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 AKIP1Q9NQ31 210 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 PRDM8Q9NQV8 689 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 SELENONQ9NZV5 590 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 SUN2Q9UH99 717 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 ENPP5Q9UJA9 477 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 COQ6Q9Y2Z9 468 aa9.65□□□□□ -0.86
SS18-203ENST00000415083 TRBV5-4A0A0C4DH59 114 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 LOC100130705A0A1B0GUX0 176 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 CREG1O75629 220 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 CLPXO76031 633 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 BCKDHAP12694 445 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 FLT3LGP49771 235 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 DAPP51397 102 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 HUNKP57058 714 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 PRKCZQ05513 592 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 CDK5R2Q13319 367 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 B3GNT8Q7Z7M8 397 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 ANKRD46Q86W74 232 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 NDNFQ8TB73 568 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 DGCR6LQ9BY27 220 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 CD244Q9BZW8 370 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 ADNPQ9H2P0 1102 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 CWH43Q9H720 699 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 PDE10AQ9Y233 779 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 SH3GLB1Q9Y371 365 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 SLC30A1Q9Y6M5 507 aa9.65□□□□□ -0.87
SS18-203ENST00000415083 TMEM221A6NGB7 291 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 TOR1BO14657 336 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 STX7O15400 261 aaKnown RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 NBNO60934 754 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 DEAF1O75398 565 aaPredicted RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 CHEK2O96017 543 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 UGT2B4P06133 528 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 RHOCP08134 193 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 ELNP15502 786 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 EEF1B2P24534 225 aaKnown RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 TTKP33981 857 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 HMGCLP35914 325 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 MAGEA2P43356 314 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 NEK2P51955 445 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 GSTM4Q03013 218 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 FAM98BQ52LJ0 330 aaKnown RBP9.64□□□□□ -0.87
SS18-203ENST00000415083 LRIF1Q5T3J3 769 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 SPESP1Q6UW49 350 aa9.64□□□□□ -0.87
SS18-203ENST00000415083 TSEN54Q7Z6J9 526 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms