RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TAP1Q03518 808 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 DSC1Q08554 894 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 GOLGA7BQ2TAP0 167 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 PTPN20Q4JDL3 420 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 KCNT2Q6UVM3 1135 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 USP53Q70EK8 1073 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 AMIGO2Q86SJ2 522 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 LZTR1Q8N653 840 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 ALG14Q96F25 216 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 SLC47A1Q96FL8 570 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 CPXM1Q96SM3 734 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 RTP3Q9BQQ7 232 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 NUSAP1Q9BXS6 441 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 KLHL25Q9H0H3 589 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 CYP3A43Q9HB55 503 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM30AQ9NV96 361 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 MYRFQ9Y2G1 1151 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 FAM32AQ9Y421 112 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 TIMM22Q9Y584 194 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 FNDC1Q4ZHG4 1894 aaPredicted RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 CCDC195A0A1B0GUA6 201 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 MYBPHLA2RUH7 354 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 NRP1O14786 923 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 MTX2O75431 263 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 URODP06132 367 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 COX4I1P13073 169 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 FUT4P22083 530 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 S100A1P23297 94 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 CDKN2BP42772 138 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 SLC11A1P49279 550 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 STARP49675 285 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 WDR5P61964 334 aaKnown RBP9.21□□□□□ -0.93
SNHG3-201ENST00000413987 PIGHQ14442 188 aaPredicted RBP9.21□□□□□ -0.93
SNHG3-201ENST00000413987 TGFBIQ15582 683 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 ARHGAP15Q53QZ3 475 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 CCDC157Q569K6 752 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 IGSF11Q5DX21 431 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 HABP4Q5JVS0 413 aaKnown RBP9.21□□□□□ -0.93
SNHG3-201ENST00000413987 C6orf52Q5T4I8 152 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 METTL21CQ5VZV1 264 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 NIPAL1Q6NVV3 410 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 GLB1L3Q8NCI6 653 aaPredicted RBP9.21□□□□□ -0.93
SNHG3-201ENST00000413987 OR10T2Q8NGX3 314 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 MSLNLQ96KJ4 702 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 OSBPL11Q9BXB4 747 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 GPR62Q9BZJ7 368 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 FBRSL1Q9HCM7 1045 aaKnown RBP9.21□□□□□ -0.93
SNHG3-201ENST00000413987 CPNE7Q9UBL6 633 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 CDH7Q9ULB5 785 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 TEX264Q9Y6I9 313 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 TSC2P49815 1807 aa9.21□□□□□ -0.93
SNHG3-201ENST00000413987 ARHGEF37A1IGU5 675 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GOLGA8TH3BQL2 631 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PER2O15055 1255 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PIAS1O75925 651 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 ERBB2P04626 1255 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GLAP06280 429 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 CYC1P08574 325 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 STAG3L3P0CL85 134 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PTGER3P43115 390 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PCP4P48539 62 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GFRA1P56159 465 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 YWHAEP62258 255 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 RPL7AP62424 266 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PRAMEP78395 509 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GAD2Q05329 585 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 CBFBQ13951 182 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 ARHGAP19Q14CB8 494 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 INSCQ1MX18 579 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 KRT80Q6KB66 452 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PMF1Q6P1K2 205 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 METAP1DQ6UB28 335 aaPredicted RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 DCDC5Q6ZRR9 648 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 TAS1R1Q7RTX1 841 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 LIMS2Q7Z4I7 341 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 NANOGNBQ7Z5D8 188 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GPR141Q7Z602 305 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 LINC00346Q8IVM7 164 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 CTAGE3PQ8IX95 158 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 SIX6OS1Q8N1H7 587 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 B3GALNT2Q8NCR0 500 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 SHKBP1Q8TBC3 707 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 BAHD1Q8TBE0 780 aaPredicted RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 NDRG1Q92597 394 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 EID2BQ96D98 161 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 QRSL1Q9H0R6 528 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 RHBGQ9H310 441 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 TFB2MQ9H5Q4 396 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 RC3H2Q9HBD1 1191 aaKnown RBP9.21□□□□□ -0.94
SNHG3-201ENST00000413987 PNPLA3Q9NST1 481 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 TMLHEQ9NVH6 421 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 MARCH5Q9NX47 278 aa9.21□□□□□ -0.94
SNHG3-201ENST00000413987 GNPTGQ9UJJ9 305 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms