RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	ASB11	Q8WXH4	323 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	ANKRD7	Q92527	254 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	RAD51AP1	Q96B01	352 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	RAB11FIP5	Q9BXF6	653 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TBC1D10A	Q9BXI6	508 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	LRRN3	Q9H3W5	708 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TOR4A	Q9NXH8	423 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	PLAA	Q9Y263	795 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	ACOT9	Q9Y305	439 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	MDC1	Q14676	2089 aa	Known RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	IGHV1OR21-1	A0A087WYE8	117 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	FAM221B	A6H8Z2	402 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ARHGEF33	A8MVX0	844 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	GFY	I3L273	518 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	RASGRF2	O14827	1237 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SLC16A5	O15375	505 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	WISP3	O95389	354 aa	Predicted RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	C1orf105	O95561	183 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	TSPAN12	O95859	305 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ALDOA	P04075	364 aa	Known RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	PROS1	P07225	676 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SLC35E2B	P0CK96	405 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CCDC166	P0CW27	439 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CYP2A7	P20853	494 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SHMT2	P34897	504 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SLC26A3	P40879	764 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SLCO1A2	P46721	670 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ID4	P47928	161 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CCL7	P80098	99 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SPIDR	Q14159	915 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	RASA2	Q15283	850 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CLPP	Q16740	277 aa	Predicted RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	AMZ1	Q400G9	498 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CYHR1	Q6ZMK1	362 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SLCO6A1	Q86UG4	719 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	OOSP2	Q86WS3	158 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	OR52E1	Q8NGJ3	308 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	EPS8L3	Q8TE67	593 aa	Known RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ISL2	Q96A47	359 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	CABS1	Q96KC9	395 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	DPYSL5	Q9BPU6	564 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	TRIM54	Q9BYV2	358 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	DERL2	Q9GZP9	239 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	SRMS	Q9H3Y6	488 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725	TFB2M	Q9H5Q4	396 aa	Known RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.79	□□□□□ -0.36
SF1-206	ENST00000413725	TBK1	Q9UHD2	729 aa		12.79	□□□□□ -0.36
SF1-206	ENST00000413725		A0A096LPK6	155 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	TLDC2	A0PJX2	215 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	BTN3A1	O00481	513 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	B4GAT1	O43505	415 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	OPA1	O60313	960 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	DKK1	O94907	266 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	CPNE6	O95741	557 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	SYF2	O95926	243 aa	Known RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	MPO	P05164	745 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	C2	P06681	752 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	LTA4H	P09960	611 aa	Known RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	HIST1H2AD	P20671	130 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	MAGEA12	P43365	314 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	CAPZB	P47756	277 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	RAB28	P51157	221 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	ATP6V0D1	P61421	351 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	PRKAA1	Q13131	559 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	CSHL1	Q14406	222 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	PPM1J	Q5JR12	505 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	ARMC6	Q6NXE6	501 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	DHRS13	Q6UX07	377 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	TIFAB	Q6ZNK6	161 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	ADAMTSL2	Q86TH1	951 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	AMIGO1	Q86WK6	493 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	SPNS2	Q8IVW8	549 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	OR4E2	Q8NGC2	313 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	OR2W6P	Q8NHA6	318 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	MCOLN3	Q8TDD5	553 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	ANKRD49	Q8WVL7	239 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	JPH3	Q8WXH2	748 aa	Predicted RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	HIST1H2AH	Q96KK5	128 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	TSNARE1	Q96NA8	513 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	GFM1	Q96RP9	751 aa	Known RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	HIST1H2AJ	Q99878	128 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	H2AFJ	Q9BTM1	129 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	VPS11	Q9H270	941 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	PARVB	Q9HBI1	364 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	NMRAL1	Q9HBL8	299 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	SPATA7	Q9P0W8	599 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.78	□□□□□ -0.36
SF1-206	ENST00000413725	CTNNAL1	Q9UBT7	734 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	LNPEP	Q9UIQ6	1025 aa		12.78	□□□□□ -0.36
SF1-206	ENST00000413725	DCHS1	Q96JQ0	3298 aa		12.77	□□□□□ -0.36
SF1-206	ENST00000413725		A0A1W2PQM1	296 aa		12.77	□□□□□ -0.37
SF1-206	ENST00000413725	NPEPPSL1	A6NEC2	478 aa		12.77	□□□□□ -0.37
SF1-206	ENST00000413725	ZNF839	A8K0R7	811 aa		12.77	□□□□□ -0.37
SF1-206	ENST00000413725		D6RAR5	112 aa		12.77	□□□□□ -0.37
SF1-206	ENST00000413725	MYO1C	O00159	1063 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms