RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 DET1Q7L5Y6 550 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 CPPED1Q9BRF8 314 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-202ENST00000413219 HERC2P3Q9BVR0 1158 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-202ENST00000413219 KLHL25Q9H0H3 589 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 SCUBE2Q9NQ36 999 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.27■□□□□ 0.36
SDCBP-202ENST00000413219 TSC22D4Q9Y3Q8 395 aa17.27■□□□□ 0.36
SDCBP-202ENST00000413219 H7C0S8 307 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 CR2P20023 1033 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 MAP2K4P45985 399 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 GNPDA1P46926 289 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 MASP1P48740 699 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 KPNA1P52294 538 aaPredicted RBP17.27■□□□□ 0.35
SDCBP-202ENST00000413219 PPP1R8Q12972 351 aaKnown RBP17.27■□□□□ 0.35
SDCBP-202ENST00000413219 DNASE1L3Q13609 305 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 DDR2Q16832 855 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 LRIF1Q5T3J3 769 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 ARMC8Q8IUR7 673 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 NETO1Q8TDF5 533 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 FAM120BQ96EK7 910 aaKnown RBP17.27■□□□□ 0.35
SDCBP-202ENST00000413219 APOL4Q9BPW4 351 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 SLIRPQ9GZT3 109 aaKnown RBP17.27■□□□□ 0.35
SDCBP-202ENST00000413219 P2RY12Q9H244 342 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 OSGIN1Q9UJX0 560 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 FBXO10Q9UK96 956 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 MAN2B2Q9Y2E5 1009 aa17.27■□□□□ 0.35
SDCBP-202ENST00000413219 CLDN24A6NM45 220 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 RGS10O43665 173 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 SEC24AO95486 1093 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 TACR2P21452 398 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 PSMB9P28065 219 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 FMO3P31513 532 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 PHKG1Q16816 387 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 PGS1Q32NB8 556 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 C18orf21Q32NC0 220 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-202ENST00000413219 C5orf22Q49AR2 442 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 ZRANB3Q5FWF4 1079 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 TMEM236Q5W0B7 351 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 GCNT7Q6ZNI0 430 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 TRIM46Q7Z4K8 759 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 SLC22A16Q86VW1 577 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 CYP4Z1Q86W10 505 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 MIB1Q86YT6 1006 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 LIX1Q8N485 282 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 KCNH6Q9H252 994 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 DSN1Q9H410 356 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 UBA2Q9UBT2 640 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-202ENST00000413219 PKP3Q9Y446 797 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 ANKRD12Q6UB98 2062 aa17.26■□□□□ 0.35
SDCBP-202ENST00000413219 A0A096LPI6 279 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SLC12A8A0AV02 714 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 WNT9AO14904 365 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 FFAR2O15552 330 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MAN1A2O60476 641 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 TBX18O95935 607 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MT-ND2P03891 347 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 CTSHP09668 335 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 EIF2DP41214 584 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MAGEA11P43364 429 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 GPR15P49685 360 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 KCNJ8Q15842 424 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 KDM4DQ6B0I6 523 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SNX29P2Q8IUI4 249 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ZDHHC21Q8IVQ6 265 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 KIAA1958Q8N8K9 716 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 IPCEF1Q8WWN9 437 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 OR52E6Q96RD3 313 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ZBED2Q9BTP6 218 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ALOXE3Q9BYJ1 711 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SARS2Q9NP81 518 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ACOT13Q9NPJ3 140 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 VNN3Q9NY84 501 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 PCDHB1Q9Y5F3 818 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 STX7O15400 261 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MITFO75030 526 aaPredicted RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MYO1DO94832 1006 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 OAZ2O95190 189 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 FSHRP23945 695 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ALDH4A1P30038 563 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SERPINB1P30740 379 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 RGRP47804 291 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 CLK3P49761 638 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ARHGDIAP52565 204 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 FCGRTP55899 365 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 LSM3P62310 102 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 TUBA1BP68363 451 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 MGAT3Q09327 533 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 C10orf120Q5SQS8 335 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 VARS2Q5ST30 1063 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 NADSYN1Q6IA69 706 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 METTL2BQ6P1Q9 378 aaKnown RBP17.25■□□□□ 0.35
SDCBP-202ENST00000413219 TUBA1AQ71U36 451 aa17.25■□□□□ 0.35
SDCBP-202ENST00000413219 SNX20Q7Z614 316 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms