RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CTAGE8P0CG41 777 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF18P17022 549 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF24P17028 368 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 DDX5P17844 614 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PON1P27169 355 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 HOXC9P31274 260 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PSMC4P43686 418 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC15A1P46059 708 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 METAP2P50579 478 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 HSD17B4P51659 736 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CLCN3P51790 818 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MFAP4P55083 255 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TAS2R40P59535 323 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 KRTAP10-8P60410 259 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 GNGT1P63211 74 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ELF3P78545 371 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPS5P82675 430 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SORDQ00796 357 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 IKQ13123 557 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMED1Q13445 227 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MYBPC2Q14324 1141 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PCLAFQ15004 111 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TAF7Q15545 349 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 NTRK2Q16620 822 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PTGISQ16647 500 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 C2orf68Q2NKX9 166 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC57Q2TAC2 916 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CDONQ4KMG0 1287 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TTMPQ5BVD1 217 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANKRD20A8PQ5CZ79 823 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 XKR9Q5GH70 373 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 GARNL3Q5VVW2 1013 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ALS2CLQ60I27 953 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACSM2BQ68CK6 577 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 METTL2BQ6P1Q9 378 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM173BQ6P4H8 233 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PQLC2Q6ZP29 291 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MTSS1LQ765P7 747 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC26A9Q7LBE3 791 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TSPAN33Q86UF1 283 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CTAGE6Q86UF2 777 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC83Q8IWF9 413 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CTAGE4Q8IX94 777 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 KIRREL3Q8IZU9 778 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 IQCKQ8N0W5 287 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SCML4Q8N228 414 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MREGQ8N565 214 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TEX9Q8N6V9 391 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF114Q8NC26 417 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 NOA1Q8NC60 698 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 HJURPQ8NCD3 748 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 AGBL3Q8NEM8 1001 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 OR14L1PQ8NHC6 308 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CFAP61Q8NHU2 1237 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF473Q8WTR7 871 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 IGSF8Q969P0 613 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC59Q96AG4 307 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC22A18Q96BI1 424 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SAT2Q96F10 170 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 RRNAD1Q96FB5 475 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ELMOD3Q96FG2 381 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 METTL2AQ96IZ6 378 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 RPGRIP1Q96KN7 1286 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 JAKMIP1Q96N16 626 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PANX2Q96RD6 677 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCT8L2Q96SF2 557 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACOX2Q99424 681 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TXLNGYQ9BZA5 131 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRIM7Q9C029 511 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 IQCGQ9H095 443 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMADHCQ9H3L0 296 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 NDST4Q9H3R1 872 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PLK3Q9H4B4 646 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ESRP2Q9H6T0 727 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZWILCHQ9H900 591 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 UBTD1Q9HAC8 227 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 LTB4R2Q9NPC1 389 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MKKSQ9NPJ1 570 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 HINT3Q9NQE9 182 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SETD4Q9NVD3 440 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CISD1Q9NZ45 108 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPL15Q9P015 296 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 MARCH4Q9P2E8 410 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 NFKBIL1Q9UBC1 381 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 UBA2Q9UBT2 640 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CFAP45Q9UL16 551 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 EXO1Q9UQ84 846 aaKnown RBP2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 CMAHPQ9Y471 501 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC42Q9Y546 428 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 GMEB1Q9Y692 573 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 STON1Q9Y6Q2 735 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 ADGRB3O60242 1522 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 NPATQ14207 1427 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 VWDEQ8N2E2 1590 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 UBN2Q6ZU65 1347 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 SYNRGQ9UMZ2 1314 aa2.4□□□□□ -2.03
HMGB3P2-201ENST00000411913 PREX2Q70Z35 1606 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARHGEF10O15013 1369 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ATP7AQ04656 1500 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 QRICH2Q9H0J4 1663 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms